Pseudomonas bubulae: V6B39_09545
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Entry
V6B39_09545 CDS
T10711
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pbub Pseudomonas bubulae
Pathway
pbub01501
beta-Lactam resistance
pbub01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6B39_09545
01503 Cationic antimicrobial peptide (CAMP) resistance
V6B39_09545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbub03036
]
V6B39_09545
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbub02000
]
V6B39_09545
01504 Antimicrobial resistance genes [BR:
pbub01504
]
V6B39_09545
Chromosome and associated proteins [BR:
pbub03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
V6B39_09545
Transporters [BR:
pbub02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
V6B39_09545
Antimicrobial resistance genes [BR:
pbub01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6B39_09545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
RibLong
OEP
Motif
Other DBs
NCBI-ProteinID:
WWR39645
LinkDB
All DBs
Position
complement(2112695..2113846)
Genome browser
AA seq
383 aa
AA seq
DB search
MQFKPAVTALVAAIALASLLSGCKKEEAAPAPQIPQVGVVTLKTQPFTLTTDLPGRTASY
RSAEVRPQVNGIILKRFFKEGSDVKIGQQLYQIDPAIYESAVLSARATLQSAKSLAQRYK
QLVAEQAVSRQEYDNAEAARLEAEAALNTAQVNLRYTKVLAPLTGRIGRSLYTEGALVTS
GQANALAVITQLDPIYVDVTQSSVEMLELRRDLASGRLKKAGENAAKVKLTLPDGSEYGQ
EGRLEFAEVSVDETTGSVTLRAVFPNPDETLLPGMFVHAQLEAGIDSNAILAPQIGVTHN
LKGQPTAMIVGPDNKVELRVLQASRTVGSNWLVEKGLNPGDRLITDGLQFIKPGIEVKIM
DKPQGETPASAPATEKAAGSKGE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagctgttaccgctctggttgctgccatcgcccttgcttcgctgctc
agcggatgcaaaaaggaagaggcagcacctgccccgcaaatccctcaggtcggcgttgtc
acgctgaaaacccagccatttaccttgaccaccgatctgcctggccgcaccgcgtcatat
cgttcggcagaagtacgcccgcaggtaaacggcatcatcctcaagcgcttctttaaagaa
ggcagtgacgtcaagatcggccagcagctctatcaaatcgatccggcgatctatgaaagc
gccgtactcagcgcccgcgccaccctgcaatcggcaaaatcactggctcagcgctacaag
caactggtcgccgagcaagccgtaagccgtcaggaatacgacaacgccgaagccgcccgc
ctggaagcagaagccgcgctgaacaccgcccaggttaacctgcgctacaccaaggtgctg
gcgccgctgaccggccgcatcggtcgctcgctgtacaccgaaggtgcactggtcaccagt
ggccaggccaatgcattggccgtgatcacccaactggacccgatctatgttgacgtgacc
cagtcctcggtagaaatgctcgaactgcgccgtgacctggccagtggccgtttgaagaag
gccggtgaaaacgccgccaaggtcaagctgaccctgcctgacggcagcgagtacggccag
gaaggtcgccttgagttcgccgaagtctcggttgatgaaaccaccggttccgtcaccctg
cgcgcagtgttcccgaaccctgacgaaaccctgttgccgggcatgtttgtccacgcgcag
ctggaagcaggcatcgacagcaatgcgatcctggcaccgcaaatcggcgtgacccacaac
ctcaagggccaaccgactgcaatgatcgttggaccggacaacaaggttgagctgcgtgta
ctgcaagcttcgcgcaccgttggcagcaactggctggttgagaaaggcctgaaccctggc
gaccgtctgattactgatggcctgcaattcatcaagcctggcattgaagtcaagatcatg
gacaagccacaaggcgaaaccccggcatctgccccggcaacagaaaaagctgcaggcagt
aaaggggaataa
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