Pseudomonas bubulae: V6B39_13025
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Entry
V6B39_13025 CDS
T10711
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pbub Pseudomonas bubulae
Pathway
pbub01501
beta-Lactam resistance
pbub01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6B39_13025
01503 Cationic antimicrobial peptide (CAMP) resistance
V6B39_13025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbub03036
]
V6B39_13025
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbub02000
]
V6B39_13025
01504 Antimicrobial resistance genes [BR:
pbub01504
]
V6B39_13025
Chromosome and associated proteins [BR:
pbub03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
V6B39_13025
Transporters [BR:
pbub02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
V6B39_13025
Antimicrobial resistance genes [BR:
pbub01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6B39_13025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
BSH_RND
Beta-barrel_RND_2
BSH_CusB
YknX_C
HH_MFP_RND
RND-MFP_C
BSH_YhbJ
BSH_Fcp1
Biotin_lipoyl
DUF3646
ULD_2
Motif
Other DBs
NCBI-ProteinID:
WWR35923
UniProt:
A0ABZ2GZM6
LinkDB
All DBs
Position
complement(2852283..2853449)
Genome browser
AA seq
388 aa
AA seq
DB search
MSSDQKPSRKRLIYLGIGGLTLAALLVANGLAARSRHEHAVSQWTEAAALPIVNVFQPLQ
NAHGDTLRLPAHLEAWSKAPIHARVNGYLQSWQTDIGSKVKAGQVLAVIDSPDLDQQLAQ
TRAHMLQEQANARLAATTATRWQNLLASHSVSRQEADEKLSNAAAAKANAQAAEADYARL
STLEAYKTIRAPFAGTITARNTDIGQLIKADTDSDTELFDLADTHQLRLYVPVPQNYASV
IRPGMQVQLSVPEHPGQMFNAKLIGNSTAIDQRSGTLMAQFVALNPGDALMPGDYAEALL
SIPADTHGVSIPASALIFRAQGTQVAVLDKARHVHLQTIHIGLDLGERLVIDQGLTATDT
VIDNPPDALREGDSVKLADAGAPHAAKA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgatcaaaaaccctcgcgcaagcgcttgatatacctgggcatcggtggcctg
accctggccgccttgctggtcgccaatgggctggccgcccgcagtcgccatgagcacgcg
gtgagccaatggaccgaagcggccgcactgccgattgtcaacgtattccagcccctgcag
aacgcccatggcgataccctgcgcctgcccgcgcatctggaggcctggagcaaggcgccg
atccatgcccgggtcaacggctacctgcaaagctggcaaaccgacattggcagcaaggtc
aaggccgggcaggtcctggcggttatcgacagtccggatctggatcagcaactggcgcag
acccgcgcccatatgctccaggagcaagccaacgcccggctcgcggccactacggccaca
cgctggcaaaatctgctggcaagccattcggtgtcgcgccaggaggctgacgaaaagcta
tccaatgctgccgccgccaaggccaatgcccaagccgctgaggcggattacgcacgactg
tcgacgctggaagcctacaagaccattcgcgcaccttttgcaggcaccatcaccgcgcgc
aataccgatatcggccagttgatcaaggccgacaccgacagcgataccgagctgttcgat
cttgccgacacgcaccagctgcgcctgtatgtgccagtgccacagaactacgccagcgtg
atccgccccggcatgcaggtacaactcagtgtgccggaacatccagggcaaatgttcaac
gcaaaactgatcggtaactcgacagcaattgaccagcgctccggcaccctgatggcccag
ttcgtcgccctcaaccctggtgacgcgctgatgcccggtgactatgccgaggcgctgctg
tcgattccggccgatacccatggcgtcagtatcccggccagcgccctgattttccgtgcc
cagggcacacaggtggcagtgctcgacaaggcccggcatgtgcatttgcaaacgatccat
atcggccttgatctgggcgaacgactggtgatcgatcaaggccttacggccaccgacacc
gtcatcgacaatccgcccgacgccttgcgcgaaggcgactcggtcaagctggccgacgca
ggagccccccatgcagccaaggcttaa
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