Pseudomonas bubulae: V6B39_14665
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Entry
V6B39_14665 CDS
T10711
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00270
Cysteine and methionine metabolism
pbub00450
Selenocompound metabolism
pbub00670
One carbon pool by folate
pbub01100
Metabolic pathways
pbub01110
Biosynthesis of secondary metabolites
pbub01230
Biosynthesis of amino acids
pbub04980
Cobalamin transport and metabolism
pbub04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
V6B39_14665 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
V6B39_14665 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V6B39_14665 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V6B39_14665 (metH)
04980 Cobalamin transport and metabolism
V6B39_14665 (metH)
Enzymes [BR:
pbub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
V6B39_14665 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
ComA
Motif
Other DBs
NCBI-ProteinID:
WWR36238
LinkDB
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Position
complement(3244112..3247822)
Genome browser
AA seq
1236 aa
AA seq
DB search
MSDRSARLQALQQALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLV
LTRPDVIGSIEKAYLDAGADILETNTFNATQVSQADYGMQALAYELNVEGARLARKVADA
KTLETPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADL
ILIETIFDTLNAKAAIFAVQGVFEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVAH
AKPISVGLNCALGASELRPYLEELSNKASTYVSAHPNAGLPNEFGEYDELPAETAKVIEE
FAQSGFLNIVGGCCGTTPGHIQAIANAVAGYAPRPIPDIPKACRLSGLEPFTIDRSSLFV
NVGERTNITGSARFARLIREDNYTEALEVALQQVEAGAQIIDINMDEGMLDSKKAMVTFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYG
AAVVVMAFDEAGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
YAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRNGLTMGIV
NAGQLEIYDQIPAELRDAVEDVVLNRTPDATDNLLAIADKYKGDGSVKEAETEEWRSWDV
NKRLEHALVKGITTHIVEDTEESRLSFKRPIEVIEGPLMSGMNIVGDLFGAGKMFLPQVV
KSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQVAKEQKCDIIGLSGLITPSLDEMVHVAREMQRQNFHLPLMIGGATTS
KAHTAVKIEPKYQNDAVIYVTDASRAVGVATQLLSKELKPAFVQKTREEYVEVRERTANR
SARTERLSYPASIAKKPQFDWAGYQPVKPTFTGAKVLDNIDLKVLAEYIDWTPFFISWDL
AGKFPRILTDEVVGEAATALYADAQEMLKKLIDEKLISARAVFGFWLANQVNDDDLELYG
DDGQPLAKLHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAY
QDAGDDYNSIMVKALADRLAEACAEWLHQQVRTRYWGYAKDEQLANEELIKEQYSGIRPA
PGYPACPDHTEKATLFKLLDPEAEEMRAGKSGVFLTEHYAMFPAAAVSGWYFAHPQAQYF
AVGKVDKDQIESYTARKGQDLSVTERWLAPNLGYDN
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcagcgctcgtctccaagcacttcagcaagccctcaaagagcgcattctg
attctcgatggcggcatgggcactatgatccaaagctaccgtctagaggaacacgactat
cgtggcacacgcttcgccgactggccgagcgacgtcaagggtaacaacgaccttctggtg
ctcacccgccccgacgtgatcggctcgattgaaaaggcctatctggatgccggtgccgat
attctcgaaaccaacaccttcaatgctacccaggtttcccaggccgactacggcatgcag
gcactggcctacgagctaaacgtagaaggcgcccgcctggcgcgcaaggtggctgatgcc
aaaacgctggaaaccccggacaaaccacgctttgttgccggtgtactgggcccgaccagc
cgcacctgctcgctgtccccggacgtaaacaaccccggctaccgcaacgtgactttcgat
gagctggtggagaactacaccgaagccaccaaaggcctgatcgaaggcggcgccgacctg
atcctgatcgagaccatcttcgacaccctcaatgccaaggccgcgattttcgccgtacag
ggcgttttcgaagagctgggtgtcgagttgccgatcatgatttccggcaccattaccgac
gcctccgggcgtaccctgtcgggccagaccaccgaagcgttctggaactcggtggcccac
gccaaaccgatttccgtgggtttgaactgcgccctgggtgccagcgaactgcgtccgtac
ctcgaagagctgtcgaacaaggccagcacctacgtctcggcgcaccccaacgccggcctg
cccaacgaattcggcgagtacgacgaactgccggcggaaaccgccaaggtcattgaagag
ttcgcccagagcggtttcctcaacattgtcggcggttgctgcggcaccacgccggggcat
atccaggccatcgccaacgccgtagccggttatgctccgcgcccgatcccggacattcca
aaggcctgccgtctctccgggcttgaaccgttcaccatcgatcgcagctcgttgttcgtc
aacgtcggcgagcgaaccaacatcaccggttctgcccgcttcgcccggctgattcgcgaa
gacaactacaccgaagccctggaagtggccctgcaacaggttgaagccggtgcgcagatc
atcgacatcaacatggacgagggcatgctggactcgaagaaggccatggtgaccttcctc
aacctgatcgccggcgagccggatatcagccgcgtaccgatcatgatcgactcctccaag
tgggaagtgatcgaagcgggcctcaagtgcatccagggcaagggcatcgtcaactcgatc
agcatgaaagaaggcgtcgagcagttcattcatcacgccaaactgtgcaagcgctatggt
gccgccgtggtggtgatggctttcgacgaagccggccaggccgacaccgaggcgcgcaaa
aaagaaatctgcaaacgctcctacgacattctggtcaacgaagtgggcttcccgccggaa
gacatcattttcgacccgaacatctttgccgtggccaccggcattgaagaacacaacaac
tacgctgtggacttcatcaatgcctgtgcctatatccgcgacgaactgccctatgccctg
acctcgggcggtgtatccaacgtgtcgttctcgttccgtggcaacaacccggttcgtgag
gcgatccactcggtgttcctgctgtatgcgatccgcaacggcctgaccatgggtatcgtc
aacgccggccagctggaaatctatgaccagatcccggccgagttgcgcgatgccgtggaa
gatgtggtgctcaaccgcacccccgatgccaccgacaacctgctggcaattgccgacaag
tacaagggcgatggcagcgtcaaggaagccgaaaccgaagagtggcgcagctgggacgtc
aacaagcgtctggagcatgcactggtcaagggcattaccacccatatcgttgaagacacc
gaagagtcgcgcctgtcgttcaaacgcccgatcgaagtgatcgaaggcccgctgatgtcg
ggcatgaacatcgtcggcgacctgttcggtgcgggcaaaatgttcctgccccaggtagtc
aagtctgcccgcgtgatgaaacaggccgtggcccacttgatcccgtttatcgaactggaa
aaaggcgacaaaccggaagccaagggcaagatcctgatggccacggtcaagggcgacgtg
catgacatcggcaagaatattgtcggcgtggtgcttggctgtaacggctacgacatcgtt
gacctgggcgtgatggtgccggcagagaaaatcctgcaggtagccaaagagcagaagtgc
gacattatcggcctttccggcctgatcacgccgtcgctggatgaaatggtgcatgttgcc
cgcgagatgcagcgtcagaacttccacttgccactgatgatcggcggtgcgactacatcc
aaggcgcacaccgcagtcaagatcgaacccaagtatcagaacgatgccgtgatctatgtc
accgacgcttctcgcgccgtgggcgtggccacgcaattgctgtccaaggaactgaaaccg
gcctttgttcagaaaacccgcgaagagtacgttgaggtccgcgaacgcaccgccaatcgt
agtgcccgcaccgagcgcctgagctacccggcatcgatcgccaaaaaaccgcagttcgac
tgggccggctaccagccggtcaaaccgaccttcaccggtgccaaggtactggacaatatc
gacctcaaggtactggccgagtacatcgactggacgccgttctttatttcctgggacctg
gctggaaaattcccgcgcatcctcaccgacgaagtcgtcggcgaagcggccacggcgctg
tatgccgatgcccaggaaatgctcaaaaaactgatcgacgagaagctgatcagcgcccgg
gcagtgttcggtttctggctggccaatcaggttaacgatgacgatttggaactgtacggt
gacgatggccagccattggccaaactgcatcacttgcgccagcagatcatcaagaccgac
ggcaagccgaacttctccctggccgactttgtcgcacccaaggacagcggcgtgaccgac
tacgtgggcggttttatcactaccgcaggcatcggtgccgaagaagtggccaaggcgtat
caggacgcgggggacgactacaactcgatcatggtcaaggccctggccgatcgtctcgcc
gaggcctgcgcagagtggctgcaccagcaggtgcggacccgctactggggctacgccaag
gatgagcagttggccaatgaagagctgatcaaggagcaatacagcggtatccgccctgct
cccggctacccggcttgcccggaccacaccgagaaagccaccctgttcaagctgctggat
ccggaggccgaagagatgcgtgcgggcaaaagcggcgtgttcctgaccgagcactacgcc
atgttcccggcggcagcggttagcggctggtacttcgcacatccgcaagcgcagtacttt
gcggtgggcaaggtcgacaaggaccagatcgaaagctacacggcgcgcaaagggcaagat
ttgagcgtgaccgagcgctggctggcgccaaacctggggtatgacaactaa
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