Pseudomonas bubulae: V6B39_15555
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Entry
V6B39_15555 CDS
T10711
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pbub Pseudomonas bubulae
Pathway
pbub01501
beta-Lactam resistance
pbub01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6B39_15555
01503 Cationic antimicrobial peptide (CAMP) resistance
V6B39_15555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbub03036
]
V6B39_15555
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbub02000
]
V6B39_15555
01504 Antimicrobial resistance genes [BR:
pbub01504
]
V6B39_15555
Chromosome and associated proteins [BR:
pbub03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
V6B39_15555
Transporters [BR:
pbub02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
V6B39_15555
Antimicrobial resistance genes [BR:
pbub01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6B39_15555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
YknX_C
BSH_RND
BSH_CzcB
BSH_CusB
RND-MFP_C
Beta-barrel_YknX
Beta-barrel_AprE
CzcB_C
LcnD_C
Motif
Other DBs
NCBI-ProteinID:
WWR40142
UniProt:
A0ABZ2HCV6
LinkDB
All DBs
Position
complement(3471809..3472921)
Genome browser
AA seq
370 aa
AA seq
DB search
MLIMIGVVLVIVAIIAGVKFAQISAMIAQAKQPLPAAVVTAMQVPFDDWQPTVTAVGSIK
AVRGVDVTTEAGGIVRSIGFTPGQEVAAQALLVQLNADSDIALLHSLEATADLAAIVLKR
DRAQLAVNAVSQAQVDTDNADLKVKLAAAEQQRALVAQKTIRAPFAGRIGITAVNPGQYL
NPGDKIATLQTFDPIYIDFNVPQTQLEAIAVGQKVSVTADGLSNQTFTGRVSTIDTRFDP
TTRNVTVEASVANPGKNLVPGMFARAVVDSGAVLRYLTVPQTAVTYNPYGTTVFIALSSK
NDKGEDVLTAQQTFIKTGPTRGDQVAILSGVKEGDLLITSGQMKLKNGSPVQIDNSAAPL
NDAAPMPQEH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcatgatcggggtggtgctggtgattgtcgcgatcatcgccggggtcaagttc
gcgcagatctcagccatgattgcccaggcaaagcagcccttgcccgccgccgtcgtcacc
gccatgcaagtaccgttcgacgactggcagccgacggtgaccgccgtgggctcgataaaa
gccgtgcgcggggtcgatgtgaccaccgaagcgggcggcattgtgcgcagcatcggtttt
acaccgggccaggaagtggcagcacaggcgctgctggttcaattgaatgctgattcggac
atcgccctgctccattcgctggaagccacggcggacctggctgccatcgtcctcaagcgt
gaccgcgcacaactggcggtcaacgccgtgtcccaggcgcaagtggacaccgacaacgca
gacctcaaagtcaaactggccgccgcagaacagcagcgggcgctggtggcgcaaaaaacc
attcgtgcgccctttgccgggcgtataggcattaccgctgtcaaccccgggcaatacctc
aaccccggtgacaaaatcgccacgttgcaaaccttcgaccccatctatatcgacttcaac
gtgccccagacccaactggaagccattgccgtcggccaaaaagtatcggtgaccgccgac
ggcctctccaaccagacattcacggggcgcgtcagcaccatagacacccgcttcgacccg
accacgcgtaacgtcacggtcgaagccagcgttgccaaccccgggaagaacctggtgccc
ggcatgtttgcccgcgcagttgtcgactcgggggcggtgctgcgctacctgaccgtgcca
cagacagccgtcacctataacccctacggcaccaccgtttttatcgcgctgtcgagcaag
aacgacaagggtgaagacgttctcacggcacaacagacctttatcaagaccggaccgacc
cgtggcgatcaggtcgccatcctgtccggtgtgaaggaaggcgacctgttgatcaccagt
ggtcagatgaaactcaaaaatggctcaccggtgcagatcgacaacagtgctgcgccgctc
aacgatgcggcgccaatgcctcaagaacattaa
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integrated database retrieval system
