Pieris brassicae (large cabbage white): 123716123
Help
Entry
123716123 CDS
T08632
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123716123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbx03041
]
123716123
Spliceosome [BR:
pbx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123716123
Complex C
U5 SnRNP specific factors
123716123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
TniB
Motif
Other DBs
NCBI-GeneID:
123716123
NCBI-ProteinID:
XP_045527652
LinkDB
All DBs
Position
1:complement(10246186..10264012)
Genome browser
AA seq
976 aa
AA seq
DB search
MDGELYDEFGNYIGPDLESDSEDEQSVYGGDNREADDEAMEEDEDADAEPEVAPMSVVLH
EDKRYYPQAIEVYGPDVETVVQEEDTQALDKPLIEPVKHKKFQLQEQQLPHTAYDMEYLA
DMLDNTNLMRNITLMGHLHNGKTSFVDCLIRQTHPDTINNDTTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKDIKGKSHLLNIMDTPGHVNFSDEVTAALRISDGAILFVDAAEGIMLNT
ERLLRHAVQERVPLTICINKIDRLILELKLPPADAYYKLRHIIDELNSVCETTHSQDNPD
EPVTVFSPLLGNICFASSLYDVCFTLESFAAMYANTHSTSGLRASDMAAWLWGDVYFNAK
TRRFSKKQPHSSAQRSFVEFILEPLYKIFAQVVGDVDTTLPDVLAELGIKLTKQESKLNV
RPLLRLVCSRFFGDFCGFVDMVTRHVPSPLDAAPRKVAHCYRGASGPLYDDMLNCDQSGR
LVAHTTKMYPTDDCTFFLVLARIMSGTLYAGQTVRVLGENYSTQDEEDSRIMNVGRLWIF
EARYKVELNRVPAGCWALIEGIDQPIVKTCTLVSADEEEELHTFKPLRFNTQAIVKIAVE
PVNPSELPKMLDGLRKVNKSYPVLSTRVEESGEHVILGTGELYLDCVMHDLRNMYSEIDI
KVADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRKR
LGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFVPAIDSFGFETDLRTHTQG
QAFCLQVFHHWQIVPGDPLDKSIIIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFF
DDPMLLELARQDVQFN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgaattgtacgatgagttcggcaactatatcggcccggacttagaatctgac
tcagaagatgagcagagtgtgtatgggggtgataatcgggaagcagatgatgaggctatg
gaagaagatgaggatgctgatgcagagcctgaagtggcacctatgtctgtcgtacttcat
gaagacaaacggtactatccacaagccattgaagtatatggtccagatgtcgaaacagtt
gttcaagaagaagacacccaagccctggataagccactgattgagccagttaagcataaa
aagtttcaactccaagagcaacagttgccacacactgcatatgatatggagtatttggct
gatatgcttgataatactaatttaatgagaaatattaccctgatgggacatttacataat
ggaaaaacatcatttgttgactgtttaattcgtcaaacacaccctgacacaattaataat
gatacaaccataccaatgagatatacagatactctatttgttgagcaagaaaggggcgtg
tccataaaatcaatgcctgtgacactccttttaaaggacataaagggaaaatcccatttg
ctgaatataatggataccccaggacatgttaactttagtgacgaagtaactgctgcttta
agaatttctgatggtgccattctatttgttgatgctgctgaaggcataatgcttaatact
gaacgattacttcgtcatgcagtacaagaacgagttccacttacaatttgtataaacaaa
attgatagattgattttggaactcaaacttcccccagcagatgcatattataaattgaga
catattatagacgagctgaactcagtttgtgaaaccactcactcacaagataatcctgat
gaacctgtgaccgtcttttcgcctttgctgggaaacatctgctttgcatcttccctgtat
gatgtctgttttacattggagtcatttgccgcaatgtatgctaatacacatagtacaagt
ggcctaagagcttcagatatggcagcttggctatggggagatgtttactttaatgccaaa
acaagacggttcagcaagaaacaaccacactcttctgcacagagaagttttgtggaattt
attttggagcctttgtataagatattcgcacaggtggtaggagatgtagacaccacgcta
ccagatgtattagcggagctaggtatcaaattgacaaagcaagagtccaaattaaatgtg
cgtccattattgcgacttgtatgcagtcggttctttggtgatttttgcggcttcgtggat
atggtgacccgccatgtgccttccccgttggacgctgccccgcgtaaagtggctcactgc
tatcgtggtgcttctggtccattatacgatgacatgctcaattgtgatcagtcgggtcgt
ctcgtggctcatacgactaagatgtatcccactgatgattgcacattctttttggtactt
gccagaataatgtctggtacgttatacgcggggcagacggtccgtgtgttaggagaaaac
tacagtacacaagatgaagaagattctaggatcatgaatgttggacggctttggattttt
gaagccagatataaagtagaattaaaccgagtacctgcaggatgctgggcgctcattgag
ggtatcgatcagcccatagtgaagacgtgtacccttgtctcagcagacgaggaggaggaa
cttcataccttcaaacctttgaggttcaacactcaagccatagttaaaatagctgtggaa
cccgtcaacccttcggagctgccgaagatgcttgatgggttgaggaaagtgaacaaatct
tacccagtactttcgacaagagtggaagaaagcggtgaacatgttatattgggaacgggt
gaactttacctcgactgtgtgatgcatgacctcaggaatatgtactcggagattgacatt
aaagtggctgatcctgtggtatcattctgtgagacggtagtggaaacatcttccctcaaa
tgtttcgcggagacaccgaataagagaaacaaattgacaatgatagctgaacctttggaa
cgaggattagccgaagatatcgaggctggagctgtttgtgtcacgtgggacaggaagaga
ttgggagagttcttccagaccaagtacgactgggacttgctagccgctcgttcaatttgg
gcgttcggaccagattcgacgggtccaaatatattggtcgatgatacgctaccctcagag
gttgacaagcatttgctggcctccgtcaaggatagcattgttcaaggattccagtggggt
accagggaaggtccattgtgtgaagagccgatacgaaatgtgaaatttaaaattttggat
gcggtgatcgctcaagagcccttacatcgtggtggaggacagataatacctacagctaga
cgggtggcatattcggctttcttaatggcaacaccgcgtttgatggagccctatttgttt
gtggaagtgcaagcaccagctgattgtgtgtcggcggtttacacagttctggctaaacgg
agaggacatgtaactcaagatgcaccggtgcccggttctcctctgtatactatcaaggca
tttgtgccagccatagattcgttcggctttgagacagatttacgtacccacacccaggga
caggccttctgcctgcaagtgttccatcactggcagattgtgcctggagatcctttggat
aagagtataattatacgacccttggaaccccagccagccactcacttggctcgtgaattc
atgataaagacacgtagacgtaaggggcttagtgaagatgtgtctatcaacaagttcttt
gacgatcctatgttgttggagcttgctcgacaagatgttcagtttaattaa
DBGET
integrated database retrieval system
