KEGG   Syntrophotalea carbinolica: Pcar_0960
Entry
Pcar_0960         CDS       T00285                                 
Symbol
cas5e
Name
(GenBank) CRISPR processing complex protein CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
pca  Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:pca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pca02048]
    Pcar_0960 (cas5e)
Prokaryotic defense system [BR:pca02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    Pcar_0960 (cas5e)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: ABA88213
UniProt: Q3A5Z4
LinkDB
Position
1130964..1131698
AA seq 244 aa
MKHLVFRLYGPLAAWGEIAVGESRHSAVYPSKSALLGLLAAALGIRRDEEEQQAALAAGY
LFAVKVLRTGSLLRDYHTTQVPDSAGKVVYRTRREELIRGKARLGTILSSREYRCDSMAL
VAVRANANAPFTLETIREKLLKPAFLLYLGRKSCPLAAPLDPVVSDWDSFGQALDEAELK
ALMVEPDDEQRWIPVEYQTRYYWEGEDSSLKAQQVLTRHDQPFSRRRWQFSQRAENLCIG
KGEG
NT seq 735 nt   +upstreamnt  +downstreamnt
atgaaacatttggtctttcgcctctatgggccgcttgcggcctggggagagattgccgtt
ggcgaatcgcgccactccgcggtttatcccagcaagtcggcgttgttgggattgttggct
gcggcgcttggcattcggcgtgatgaagaggagcaacaggctgcattggctgccgggtat
ctatttgccgtcaaagtattgcgaaccggttcgttgctaagggactatcatacgacacaa
gttccggattcagcaggaaaggtggtttatcgcacccgtcgcgaagaactgatacgcggt
aaagcacgtctcggaacgatcctttccagccgtgaatatcggtgtgattctatggccttg
gtcgctgtcagggctaatgcaaatgctccttttactttggaaacaattcgagagaaattg
ttgaaaccggcattccttctttaccttgggcggaaatcctgtcctttggctgctcccctt
gatccggttgtcagcgattgggacagtttcggacaagctctggatgaagccgaactcaaa
gctttgatggtagagcccgacgatgaacagcgatggatacctgtggaataccagacccgt
tattactgggagggtgaagacagctctctgaaagcgcagcaggtattaacccgccatgac
cagcctttctctcggagacgttggcaattttctcagcgtgcggaaaacctgtgtatcggg
aagggagagggctga

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