Pseudomonas canadensis: V6L78_20500
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Entry
V6L78_20500 CDS
T10710
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00010
Glycolysis / Gluconeogenesis
pcaa00020
Citrate cycle (TCA cycle)
pcaa00620
Pyruvate metabolism
pcaa00785
Lipoic acid metabolism
pcaa01100
Metabolic pathways
pcaa01110
Biosynthesis of secondary metabolites
pcaa01120
Microbial metabolism in diverse environments
pcaa01200
Carbon metabolism
pcaa01210
2-Oxocarboxylic acid metabolism
Module
pcaa_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
V6L78_20500 (mdeB)
00020 Citrate cycle (TCA cycle)
V6L78_20500 (mdeB)
00620 Pyruvate metabolism
V6L78_20500 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
V6L78_20500 (mdeB)
Enzymes [BR:
pcaa01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
V6L78_20500 (mdeB)
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Paralog
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
PDH_E1_N
Motif
Other DBs
NCBI-ProteinID:
WWL82287
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Position
complement(4410873..4413539)
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AA seq
888 aa
AA seq
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MNGFTNAVIDQQELDEWRDALASLVTHAGPARARQILDLLAQDASAPHIDWKPRHGTPYI
NSISVEQQPVFPGDLATEERLASLVRWNALAMVVRANQAYGELGGHIASYASAADLFEVG
FNHFFRARKEGFGGDLVFYQPHSAPGIYARAFLEGRLSEDDLAHYRQEIGGPAQGARGLS
SYPHPWLMPDFWQFPTGSMGIGPISSIFQARFMRYLQHRNLQDTTDRHVWGVFGDGEMDE
PESMSALTLAAREGLDNLTWVVNCNLQRLDGPVRGNGRIIDELEALFAGAGWNVIKLVWG
SDWDALLAKDADGSLVNILSNTVDGQFQTFAAKDGAYNREHFFGQSESLARLVEGMSDEQ
IDRLKRGGHDMVKIHAAYHAARRVKGKPTVILAQTKKGFGMGEAGQGKMTTHQQKKLDRD
ALIAFRNRFQLPLTDEQTESLSFFKPAEDSLELRYLHQRRTALGGYVPSRSQGAAPVSVP
AISGYAGFATAADGKEMSTTMAFVRMLTNLLKDKALGPRIVPIVADEARTFGMANLFKQI
GIYSSVGQRYEPEDIGSILSYREATDGQILEEGISEASAISSWVAAATSYSVHGLRMLPF
YIYYSMFGFQRVGDLIWAAADQRARGFLLGATAGRTTLGGEGLQHQDGSSHLTAATVPNC
RAYDPAFAGEFAVILDHGMRQMLEHDVDEFYYVTLMNENYPQPSLPDGVEAAIIKGMYRL
QGSADAQVRLLGSGTLVREAQAAAQLLADDWQVTSDVFSVTSFSELARDAREVERWNRLH
PQAVARVSHVNECLPKGVPVIAVTDYVRAVPQMIGAYLDSSYTVLGTDGFGRSDTRAALR
DFFEVDRHHIVLAALTALVKQGRLEARVCQEAIERYDLQAERAASWNC
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtttcacgaatgcggtgattgatcagcaagagttggatgagtggcgcgacgcc
ctggcgtccctggtcacccacgccggcccggcgcgggcgcggcagatcctcgacctgctg
gcccaggacgccagtgcgccgcacatcgattggaaaccgcgccacggcacgccctacatc
aatagcatcagcgtcgagcagcaaccggtattccccggcgacctcgctaccgaagaacgt
ctggcctcgctggtgcgctggaacgcgttggccatggtggtgcgggccaaccaggcctac
ggcgagctgggtggccatatcgccagttacgccagcgcggcggacttgttcgaagtcggc
ttcaaccacttttttcgcgcccgtaaagagggcttcggcggcgatctggtgttctatcag
ccgcattccgcgccaggcatctatgcacgcgcgttccttgaagggcgtttgagcgaagac
gacctggcgcactatcgtcaggaaataggtgggcccgcgcagggcgcacgcggcctgtcc
agctacccgcacccgtggctgatgcccgacttctggcagttccccaccggttccatgggc
atcggccccatcagttcaatcttccaggcgcgcttcatgcgctacttacagcaccgcaac
ttgcaggacaccactgaccgtcacgtctggggcgtcttcggcgacggcgagatggacgaa
ccggaaagcatgtcggccctgaccctggccgcccgcgaaggcctggacaacctgacctgg
gtggtcaactgcaacctgcaacgcctcgacgggccggtacgcggcaacgggcgcatcatc
gatgagctggaggccttgtttgccggcgccggctggaacgtgatcaagttggtgtggggc
tcggactgggatgcgttactggccaaggacgctgacggttcgctggtcaatattttgtcc
aacacggttgacggtcaatttcagaccttcgccgccaaggacggcgcctacaaccgcgaa
cacttcttcggccagagcgagtccctggcgcggctggtcgagggcatgagcgatgagcag
atcgaccgcctcaagcgcggcggccacgacatggtaaagatccacgccgcctaccacgcc
gcacggcgggtcaaaggcaaacccacggtgatcctggcccagaccaaaaagggctttggc
atgggcgaggccgggcagggcaagatgaccacccaccagcagaagaagttggaccgcgat
gcgttgatcgccttccgcaatcgcttccaattgccgctgaccgatgaacagaccgaatcc
ctgagcttcttcaaaccggccgaggacagcctggagttgcgctatctgcaccagcgtcgc
acggcgttgggcggctacgtgcccagtcgcagccagggcgccgccccggtcagcgtgccg
gccatatcgggttatgccggcttcgccacggctgccgacggcaaggaaatgtccaccacc
atggccttcgtgcgcatgttgaccaacctgctcaaggacaaggcgctgggaccgcgcatc
gtgcctatcgtggcagatgaagcgcgcacgttcggcatggccaacctgttcaagcagatc
ggcatttattccagtgtcggccagcgttacgagccggaagacatcggctcgatcctcagc
taccgcgaagccaccgacgggcagatcctggaggagggcatcagcgaagccagcgccatc
agttcctgggttgcggcggccaccagctattcggtgcatggcctgcgcatgttgccgttc
tacatctattactcgatgttcggcttccagcgcgtcggcgacctgatctgggccgccgct
gaccaacgtgcccgtggcttcctgctcggcgccaccgccggacgtaccaccctgggtggc
gagggcttgcagcaccaggacggcagcagccacctcaccgctgccaccgtgcccaactgc
cgcgcctacgacccggcgttcgccggggaattcgcggtgatcctcgaccacggcatgcgc
cagatgctcgaacacgatgtggacgagttctactacgtgaccctgatgaacgaaaactac
ccgcagcccagcctgccagacggagttgaagcggcgattatcaagggtatgtaccgcctg
caaggctcggccgatgcccaggtgcgcctgctcgggtccggcacgctggtacgcgaggcg
caagcggcggcacagttgctggcggatgattggcaggtgacgagcgacgtgttcagcgtc
accagtttcagcgagctggcgcgggatgcgcgggaggtggaacgctggaaccgcttgcat
ccgcaggccgttgcgcgggtcagccatgtgaatgaatgcttgcccaaaggcgtgccggtg
attgcggtgactgactatgtgcgggcagtgccgcagatgattggcgcttacctggattcc
agctacaccgtgctggggacggacggctttgggcgcagtgatacgcgggcggcgctgcgg
gatttctttgaggtggaccgccatcacattgtgctggcggcgctgacggcgttggtgaag
caggggcgtctggaggcgcgggtgtgccaggaggcgattgagcgttatgacctgcaggcc
gaacgcgcagcctcctggaattgctga
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