Pseudomonas canadensis: V6L78_20825
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Entry
V6L78_20825 CDS
T10710
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa01501
beta-Lactam resistance
pcaa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6L78_20825
01503 Cationic antimicrobial peptide (CAMP) resistance
V6L78_20825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_20825
01504 Antimicrobial resistance genes [BR:
pcaa01504
]
V6L78_20825
Transporters [BR:
pcaa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
V6L78_20825
Antimicrobial resistance genes [BR:
pcaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6L78_20825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ParB_C
Motif
Other DBs
NCBI-ProteinID:
WWL82349
LinkDB
All DBs
Position
4496096..4499194
Genome browser
AA seq
1032 aa
AA seq
DB search
MPQFFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDES
VVSLIEQELNGADHLLYFESQSSLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQA
VTQQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGAE
RAMRIWIDPQKLIGFNLTPADVNAAISGQNAQVSAGSIGDLPGTNTQEITAAILVKGQLS
TPAEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANALS
TATLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQN
VRYTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMA
TEGLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILFS
AFLALTLTPALCATLLKPIAKGEHHAKGGFFGWFNQRFESLTDRYEGWVAYALKRSGRYL
LIYLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVHVAEQIEAHNAEEP
GVGDTTMIMGFSFSGSGQNAALAFTTLKDWSERSSDDSASSIADRANMAFSELKDAVAYA
ILPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALAEAPQ
VQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVADL
MKINVRNNAGKMVPLSSFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMDEIQR
LVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVLLVVP
LGVLGAVLAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTATLKA
ARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITATLAVVFVPVFFVV
VMKLVRKRHKTD
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagttctttattgaccgcccgatcttcgcctgggtggtcgccctgtttatcctg
ctggccggcctgctggcaatcccgcaattgccggtggcgcagtaccccaacgtggctccg
ccgaaagtcgagatctatgcggtgtaccccggtgcgtcggcgcagaccctggatgaaagc
gtggtgagcctgatcgagcaggagctcaacggcgccgatcacctgctgtatttcgagtcc
cagagcagcctcggttcggccaccatcaccgccaccttccagccgggcaccaacccggaa
atggcccaggtggacgtgcaaaaccgccttaaagcggtcgagccgcgcctgccgcaagcg
gtgacccagcaaggcttgcaggtggagaaagtctccgccggtttcctgctgctggtgacc
ctcacttccaacgacggcaagctcgatgacgtggcgctgagtgattacctggcgcgcaac
gtgatgaacgaactcaagcgtctcgacggtgtgggcaaggcccagctgtatggcgccgag
cgcgccatgcgcatctggatcgacccgcagaaactgatcggcttcaacctgacgccggcc
gacgtgaacgccgcgatcagcgggcagaacgcccaggtctcggcgggcagcatcggggat
ctgccgggcaccaacacccaggaaatcaccgccgcgatcctggtcaagggccagctttca
acgccagccgaatttgccgacatcgtgctcaaggccaaccccgacggctcgaccgtgcgc
atcggcgatgtggcgcgggtggaagtcggcagccaggaataccagttctccacccgcctg
aacggcaagccgtccaccgccgtcagcgtgcagttgtcgcccggcgccaatgcgctgagc
accgccaccctggtgcgggcaaagatggacgagctgtcgcgctacttcccggccaacgtg
gagtacaagatcccgtatgacacctcgccgttcgtcaaggtctcgatcaccaaggtggtc
tacaccctgctcgaagcgatggcactggtgtttgcggtgatgttcctgttcctgcagaac
gtgcgctacaccttgatcccgacgctggtggtgccgattgccctgatgggcacctttgcc
accatgctgttgctgggcttctcgatcaacgtactgaccatgttcggcatggtactggcc
atcggcatcctggtcgacgacgccattgtggtggtggagaacgtcgaacgcatcatggcc
accgagggtctgtcgcccaaggaagcgacgaaaaaagccatgggccagatcaccggggcc
atcatcggcatcacgctggtgctggtggcggtgttcctgccgatggcgttcatggccggt
tccgtgggggttatctaccagcagttttcgttgtcgatggccacctcgatcctgttctcg
gcgttcctcgccctgaccttgaccccggccctgtgcgccaccttgctcaagccgatcgcc
aaaggcgaacaccatgccaagggcggtttcttcggctggttcaaccagcgctttgaaagc
ctcaccgaccgctatgaaggctgggtggcgtatgccctcaagcgcagcgggcgttacctg
ttgatctacctggtgctgctggtgggcctgggctggatgttcagccgcctgccctcctcg
ttcctgccggtggaagaccagggctacaccatcaccgacatccagttgccaccgggtgcg
agcaagaaccgcacggtgcacgtggccgagcagatcgaagcgcacaacgccgaggaaccc
ggggtgggcgacaccaccatgatcatgggtttcagtttctccggttcagggcagaacgcc
gcgctggcatttaccacgctcaaggattggtccgagcgcagcagcgatgattcggcctcg
tcgattgccgaccgcgcgaacatggccttcagcgagctcaaggacgcggttgcctacgcg
atcctgccgccgccggtggacggcctgggcacgtccagcggcttcgagttccgtctgcaa
gaccggggtggcgtcggccatgccgcattgatggcggcacgtaccgagctgctggccgcc
gccgagaaaagcccgatcctggccaacgtgcgcgaaagcgccctggccgaagcaccgcaa
gtgcaactggaagtggaccgcaagcaggccaacgcactgggcgtgtcatttgccgatgtg
ggcaatgtgctctcctcggccatcggttcggcctatatcaacgacttccccaaccagggc
cgcatgcagcgggtggtggtgcaggccgaaggcgaccaacgcagccaggtggcggacttg
atgaaaatcaacgtgcgcaacaacgccggcaaaatggtgccgctgtcgtcctttgtcgaa
gccaaatggacccagggcccgacgcagctgacgcgctataacggctacccggccatcgcg
atttccggcgaagcggcaccgggacacagtaccggtgaagcgatggacgagatccagcgc
ctggtcagccagttgccggcaggtttgggccaggaatggaccggcttgtcgttgcaggaa
cgtctgtccggcgctcaagcacccttgctgctgggcttatcgctgctgatcgtgttcctg
tgcctggcggcgctgtacgaaagctggtcgatcccgacttcggtgttgctggtggtgccg
ctcggtgtactcggcgcggtcctcgcggtgggcttacgtggcatgcccaacgatgtgttc
ttcaaggtcggcttgatcaccatcatcggtctctcggcgaagaacgcaatcctgatcatc
gagttcgccaaggacctgtatgaccagggtgaagacctggtcaccgccaccttgaaagcc
gcacgcttgcgtctgcgaccgatcatcatgacgtccctggcgttcattcttggcgtggtg
ccgttggcgattgccaccggggccagctcggcaagccaacaggcgattggtaccggcgtg
atcggcgggatgatcaccgcgacgctggcagtggtgttcgtgccagtgttcttcgtagta
gtcatgaagctagtgcgtaaacgccacaaaacagactga
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