Pseudomonas cannabina pv. alisalensis: JGS08_12190
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Entry
JGS08_12190 CDS
T07379
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Module
pcab_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_12190
01504 Antimicrobial resistance genes [BR:
pcab01504
]
JGS08_12190
Transporters [BR:
pcab02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JGS08_12190
Antimicrobial resistance genes [BR:
pcab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
JGS08_12190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QQN24303
LinkDB
All DBs
Position
complement(2677898..2681089)
Genome browser
AA seq
1063 aa
AA seq
DB search
MNFSKFFISRPIFAAVLSLLILIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG
ETVASPLEQAITGVEGMLYMSSQATADGKLTLTITFALGTDLDNAQVQVQNRVTRSEPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAVLNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTATDVVNAIREQNRQVAAGQLGSPPSPNATSFQMSINTQ
GRLVSEEEFENVVVRAGADGEITRLKDIARIELGSSQYALRSLLNNQPAVAIPIFQRPGS
NAIDISNDVRARMAELKQSFPEGMDYSIVYDPTIFVRGSIEAVIHTLFEALILVVLVVIL
FLQTWRASIIPLVAVPVSLIGTFAVMHMFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIELGLEPVAATHKAMAEVTGPIIATALVLCAVFVPAAFISGLSGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLKAHDAPKDGFSRFLDKLLGGWLFRPFNRFFEKASHGYVGTV
ARVIRSSGIALLVYAGLMVLTWMGFASTPTGFVPSQDKQYLVAFAQLPDAASLDRTEDVI
KRMSELALKQPGVQDAIAFPGLSINGFTNSPNNGVVFVTLKPFDERKDASLSANAIAGAL
NGQFASIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKETQNIIAKSRSVPE
LAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQVYLGSLYANDFNRFGRTYQVN
VQAEQQFRQDADQIAQLKVRNNLGEMIPLATFVKVSDTAGPDRVMHYNGFITAEINGAAA
PGFSSGQAQAAVEKLLREELPSGMIYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAIAGVMIAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKD
KQAEGMSPLDAVLEACRLRLRPILMTSFAFIMGVVPLVLSSGAGAEMRHAMGVAVFSGML
GVTFFGLLLTPVFYVLIRNYVERKEARKAARAQPLQKLPAEMH
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctccaaattctttatctcacggccgatcttcgccgccgtgctgtcgctgctg
atcctcatcgccggttccatctcgctgttccagctgccgatcagcgaatacccggaagtt
gtcccgccgactgtcgtggtccgcgccaacttccccggcgccaacccgaaggtgatcggc
gaaaccgtcgcttcgcctctggaacaggcgattaccggcgtcgaaggcatgctgtacatg
tcctcgcaggccaccgccgacggcaagctgacgctgaccatcaccttcgcactgggcact
gacctggacaacgcgcaagtgcaggtgcaaaaccgcgtgacccgcagcgaacccaaattg
cccgaagaagtgacgcgcatcggtatcaccgtggacaaggcctcccctgacctgaccatg
gttgtacacttgacctcgccggacaagcgctacgacatgctgtacctgtccaactacgcg
gtgctcaacatcaaggacgaactggcgcgcctcggcggcgtcggcgacgtgcagctgttc
ggcatgggcgattactcgctgcgcgtctggctcgatccgaacaaaaccgcgtcacgcaac
ctgaccgccaccgacgtggtcaacgcgattcgcgagcagaaccgccaggtcgctgctggc
caactgggctctccgccctcgccgaatgccaccagcttccagatgtcgatcaacactcag
ggccgcctggtcagtgaggaagagttcgaaaacgtggtggtgcgtgccggtgccgatggc
gaaatcactcgtctgaaggatattgcacgcatcgaactgggttccagccagtacgcattg
cgttcgctgctcaacaaccagcctgcggtggcaatcccgatcttccagcgtcccggctcc
aacgctatcgacatttccaacgatgtacgggcgcggatggccgaactgaaacagagcttc
ccggaagggatggattacagcatcgtctatgacccgaccattttcgttcgcggttccatc
gaagcggtgattcacacgctgttcgaagcactgattctggtcgtgctggtggtgatcctg
ttcctgcaaacctggcgcgcttcgatcattccactggtcgccgtaccggtttcgctgatc
ggcaccttcgccgtgatgcacatgttcggcttctcgctgaatgcattgtcattgttcggg
ctggtgctggcgatcgggattgtggtggacgatgccatcgtggtggtggagaacgtcgaa
cgtaacatcgaactggggcttgaaccggtcgccgccacgcacaaggccatggccgaagtg
actggcccgatcatcgcgacggcattggtgctgtgcgcggtgttcgtacctgcggcgttc
atttccgggctcagcggacagttctacaaacagttcgcgctcacgattgccatctcgacg
gtcatctcggcgttcaactcgctgacgctctcgccggcactggccgcggtattgctcaag
gctcatgacgcacccaaagacggcttctcgcgcttcctcgacaagctgctcggcggctgg
ttgttccgcccgttcaaccgctttttcgaaaaagccagtcatggctatgtcggcacggtt
gccagggtcattcgcagcagcggcatcgccttgctggtgtatgcgggcctgatggtcctg
acctggatgggctttgccagcacaccgaccggcttcgtaccgagccaggacaagcaatac
ctggttgcattcgcccagttgccggacgccgcgagcctggatcgcaccgaagacgtcatc
aaacgcatgtccgagctggccctcaagcagcccggcgtacaagacgcaatcgccttcccc
ggcctttcgatcaacggcttcaccaacagccccaacaacggcgtggtgttcgtgaccctc
aaaccgttcgatgagcgcaaggacgccagcctgtcagccaacgcgattgccggcgcgctg
aacggccagttcgcctcgattcaggaagcctacatggcgatcttcccgccaccgccggtt
cagggtctgggcaccattggcggcttccgtctgcaaatcgaagaccgtggcaacctgggc
tatgacgagctgtacaaggaaacccagaacatcattgcgaaaagccgtagcgtgccggaa
ctggccgggctgtttaccagctacacggtgaacgtgccacaggtcgatgccgcaatcgat
cgtgaaaaagccaagacgcatggcgtggcggtcagcgatatcttcgacaccctgcaggtg
tacctgggctcgctgtatgccaacgacttcaaccggtttggtcgcacttaccaggtcaac
gttcaggctgaacagcagttccgccaggacgctgatcagatcgcccagctcaaggtgcgc
aacaacctcggcgaaatgatccccctggccaccttcgtcaaagtcagtgacaccgcaggt
cccgaccgggtcatgcactacaacggcttcatcaccgccgaaatcaacggcgctgcggca
ccagggttcagctctggccaggctcaggcggcggtggaaaaactgcttcgtgaagaactg
cccagcggcatgatctacgaatggaccgacctgacctatcagcagatcctgtcgggcaac
accgcgctgttcgtgttcccgctctgcgtactgctggcgtttctggtactggcggctcag
tacgaaagctggagcctgccgctggccgtcatcctgatcgtaccgatgaccctgctctcg
gccattgccggggtgatgattgcgggtagcgacaacaacatcttcacccagatcggcctg
atcgtactggtaggtctggcgtgcaagaacgcgattctgatcgtcgagttcgccaaggat
aaacaggctgaaggcatgagcccgctggatgcggtgctggaggcttgccggctgcggctg
cgcccgattctgatgacctcgttcgcgttcatcatgggcgtcgtaccgctggtcctgtcc
agcggtgccggtgccgaaatgcgtcacgcgatgggtgttgcggtgttctccggcatgctc
ggggtcaccttcttcggcctgctgctgacaccggtgttctacgtgctgatccgtaactat
gtcgagcgcaaggaggcccgcaaggccgcccgtgcgcagccactgcaaaaactgcctgcg
gagatgcattga
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