Pseudomonas cannabina pv. alisalensis: JGS08_13910
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Entry
JGS08_13910 CDS
T07379
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00270
Cysteine and methionine metabolism
pcab00450
Selenocompound metabolism
pcab00670
One carbon pool by folate
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01230
Biosynthesis of amino acids
pcab04980
Cobalamin transport and metabolism
pcab04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JGS08_13910 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JGS08_13910 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JGS08_13910 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JGS08_13910 (metH)
04980 Cobalamin transport and metabolism
JGS08_13910 (metH)
Enzymes [BR:
pcab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
JGS08_13910 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QQN19759
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Position
3118785..3122504
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AA seq
1239 aa
AA seq
DB search
MSDRSARHQAFLDALKQRILILDGGMGTMIQSYRLEEQDYRGKRFADWPSDVKGNNDLLI
LTRPDVIGAIEKAYLDAGADILETNTFNATQVSQADYGMESIVYELNVEGARLARKVADA
KTLETPDKPRFVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADL
ILIETIFDTLNAKAAIFAVQGVFEELGVELPIMISGTITDASGRTLSGQTTEAFWNSISH
AKPISVGLNCALGASELRPYLQELANKANTHVSAHPNAGLPNAFGEYDELPSQTAKIIEE
FAQSGFLNIVGGCCGTTPAHIKAIAEAVSGYAPREIPDIPKACRLSGLEPFTIDRQSLFV
NVGERTNITGSARFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHARLCKRYG
AAVVVMAFDEQGQADTEARKKEICKRSYDILVDEVGFPPEDIIFDPNIFAIATGIEEHNN
YAVDFINACAYIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLHAIRNGLSMGIV
NAGQLEIYDQIPAELRDCVEDVVLNRTADGTDALLAIADKYKGDGSVKEAETEEWRSWPV
NQRLEHALVKGITTHIVQDTEESRLGFTRPIEVIEGPLMAGMNVVGDLFGAGKMFLPQVV
KSARVMKQAVAHLIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQVARDEKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTS
KAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPAFIEKTRLEYIEVRERTSAR
SARTERLSYGAAVAKKPQFDWENYTPAKPTFTGTRVLQDIDLNVLAEYIDWTPFFISWDL
AGKYPRILTDEVVGEAATALFEDARQMLRKLIDEKLISARAVFGFWPANQVNDDDLQVYA
DDGKPLATLHHLRQQTIKPDGKPNLSLADFVAPKNSGLTDYIGGFITTAGIGAEEIAKAY
QDKGDDYNSIMVKALADRLAEACAEWLHQQVRKEYWGYAKDEALDNESLIKEQYMGIRPA
PGYPACPDHTEKGTLFALLDPLPEGTPEHTPGKSGVFLTEHYAMFPAAAVSGWYFAHPQA
QYFAVGKVDKDQVESYTARKGQDLSVTERWLAPNLGYDE
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccgcagcgcccgccatcaagcctttctcgacgctctcaaacagaggattctg
atcctcgatggcggcatgggcacgatgattcagagctaccggctcgaagagcaggactac
cggggcaagcgtttcgccgactggccgagcgatgtcaaaggcaacaacgacctgttgatc
ctgactcgccccgatgtgatcggcgcgattgaaaaagcctacctcgatgcaggcgccgac
attctcgaaaccaacacgttcaacgctactcaggtgtcccaggccgattacggcatggaa
tcgatcgtctacgagctgaacgtcgaaggcgctcggctggcgcgcaaggtggcagacgcc
aagaccctcgaaacccctgacaaaccgaggtttgtcgccggtgttctgggcccgaccagc
cggacctgctcgctgtcaccggacgtcaacaaccccggctatcgcaacgtcacgttcgat
gaactggtggagaactacaccgaagccaccaagggcctgatcgaaggcggcgctgacctg
attctgatcgaaaccattttcgacacattgaacgccaaagccgcgatttttgccgtacag
ggcgtattcgaagagctgggcgtcgaactgccgatcatgatttccggcaccatcaccgac
gcctcggggcgcacgctgtccgggcagaccaccgaagcgttctggaactcgatcagccac
gccaaaccgatctcggttggtttgaactgcgcattgggcgcgagcgagctgcgtccttat
ctgcaagagctggccaacaaggccaatacgcatgtgtctgcgcaccccaacgccggcctg
cccaatgctttcggtgaatacgacgaattaccgagccagaccgcgaagatcatcgaagaa
ttcgcccaaagcggctttctgaacatcgtcggcggctgctgcggcaccacgcctgcgcac
atcaaggcgattgccgaagccgtttccggctacgcgccgcgtgagattccggatatcccg
aaagcctgtcgcctgtcaggtctcgaaccgttcaccatcgatcgtcagtcgctgttcgtc
aatgtcggcgagcgcaccaacatcaccggctctgcccgctttgcccgcctgattcgtgaa
gacaactacaccgaagcgctggaagtcgccctgcagcaggtcgaagccggtgcccaggtg
atcgacatcaacatggacgaagggatgctcgactcgaagaaggccatggtgaccttcctc
aacctgatcgcaggcgaaccggatatctctcgcgtgccgatcatgatcgactcctccaaa
tgggaagtgatcgaagccggcctgaagtgcattcagggcaagggcatcgtcaattcgatc
agcatgaaagaaggcgtcgagcagttcatccatcatgctcgcctgtgcaagcgttatggc
gctgcggtggtggtcatggcgttcgatgaacagggccaggccgataccgaggcgcgcaag
aaggaaatctgcaaacgttcctacgacattctggtcgacgaagtgggcttcccgccggaa
gacatcattttcgacccgaacatctttgccatcgccaccggcatcgaagagcacaacaac
tacgccgtcgacttcatcaatgcctgtgcctacatccgtgatgaactgccgtacgccctg
acctcgggcggtgtgtccaacgtctccttctcgttccgcggcaacaatccggtgcgcgag
gcgattcactcggtgttcctgctgcatgcgatccgtaacggcctgagcatgggcatcgtc
aatgccgggcagctggaaatctacgatcagatcccggccgagttgcgtgattgcgtggaa
gacgtggtgctcaaccgcacggcggacggcaccgacgccctgctggcgattgccgacaag
tacaagggcgacggcagtgtaaaagaagccgaaaccgaggaatggcgcagctggccggtc
aatcagcggctggaacacgcgctggtcaagggcatcaccacgcacatcgtgcaggacacc
gaagaatcgcgcctgggcttcacccgccccatcgaggtaatcgaaggcccgctgatggcg
ggcatgaacgtggtgggcgacctgttcggcgcgggcaagatgttcctgccgcaggtggtc
aaatcggcccgtgtgatgaaacaggcggtggcgcacttgatcccgttcatcgaactggaa
aaaggcgacaagcccgaagccaagggcaagatcctcatggccacggtcaagggcgacgtc
cacgacatcggcaagaacattgtcggcgtggtgctgggctgtaacggttatgacattgtc
gatctgggcgtgatggtgcctgccgagaaaatcctgcaggtggcccgcgacgagaagtgc
gacatcatcggtctgtccgggctgatcaccccgtcgctggacgaaatggtgcacgttgcc
cgtgaaatgcagcgtcaggacttccacctgccgttgatgatcggcggcgcaaccacctcc
aaggcgcacacggcagtcaagatcgagcccaagtacagcaacgatgcagtgatttacgtc
accgacgcgtcccgtgccgtcggcgttgcgacgcagttgctgtccaaggagctgaaaccg
gcgttcatcgaaaagacccgcctggaatacatcgaagtgcgcgagcgcacctcggcccgc
agcgcgcgcaccgaacgcctgagctatggcgcagcggtggcgaaaaagccgcagttcgac
tgggaaaactacactccggccaagccgaccttcaccggcactcgcgttctgcaggacatc
gacctgaacgtgctggccgaatacatcgactggacaccgtttttcatctcctgggacctg
gccggcaagtacccgcgcatcctgaccgacgaagtggttggcgaagcggccactgcgctg
tttgaagatgcccggcagatgctgcgcaagctgatcgacgagaagctgatcagcgcgcgt
gcggtgttcggtttctggccagccaatcaggtcaacgatgacgatctgcaagtctacgct
gacgacggcaaaccgctggcaacacttcatcacttgcgtcagcagaccatcaagcctgac
ggcaagccgaacttatcgctggccgacttcgtcgcgcccaaaaacagcggcctgaccgac
tacattggtggcttcatcaccaccgccggcatcggtgccgaagagattgccaaggcctat
caggacaaaggcgacgactacaactcgatcatggtcaaagcgctggccgaccgcctcgcc
gaggcctgcgccgaatggctgcaccagcaggtgcgcaaggaatactggggctatgccaaa
gacgaagcgctggacaacgaatcgctgatcaaggagcaatacatgggtattcgcccggct
cctggctatccggcatgccctgatcacacggaaaaaggcactctgttcgccctgctcgat
ccgctccccgaaggcaccccggagcacacgccaggtaaaagtggtgtattcctcaccgag
cattacgcgatgttccctgcggcggcagtcagcggctggtatttcgctcatccgcaggcg
cagtattttgcagtgggcaaggtcgacaaggatcaggtcgaaagctacacggcgcgcaaa
ggccaggacctgagcgtgaccgagcgctggctggcacccaacctgggctacgacgagtaa
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