Pseudomonas cannabina pv. alisalensis: JGS08_17705
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Entry
JGS08_17705 CDS
T07379
Symbol
rlmM
Name
(GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcab03009
]
JGS08_17705 (rlmM)
Enzymes [BR:
pcab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
JGS08_17705 (rlmM)
Ribosome biogenesis [BR:
pcab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JGS08_17705 (rlmM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RlmM_FDX
RLMM_N
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QQN20453
LinkDB
All DBs
Position
complement(3970800..3971873)
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AA seq
357 aa
AA seq
DB search
MNTLFMHCRPGFEGEVCSEIADHAARLDVAGYAKARPDTACAEFICTDADGPERLMSGQR
FDKLIFPRQWARGLFLDLPETDRISVILAQLSAFPACGSVWLEVVDTNDGKELSNFCKKF
EAPLRKALSQAGKLVDDPRKPRLLLTFKSGREVFLGMADADNSAMWPMGIPRLKFPREAP
SRSTLKLEEAWHHFIPRDQWDERLSGDMTGVDLGAAPGGWTYQLVRRGMLVTAIDNGPMA
ESLMDTGLVQHLMADGFTYKPRQPVDWMVCDVVEKPARNAALLETWLGEGLCREAVVNLK
LPMKQRYAEVRRLLDRIEEGFQARGVRVSIGCKQLYHDREEVTCHLRRLDVAKAAKR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgctgtttatgcattgccgacccggttttgaaggggaagtctgttcggaaatc
gctgaccatgccgcgcgtcttgatgttgccggttacgccaaggcacgacccgacaccgct
tgcgccgaatttatctgcacggacgctgacgggcctgagcggctgatgagcggccagcgc
ttcgacaagctgattttccctcggcagtgggcgcgaggcttgttcctcgacctgccggaa
accgaccgcatcagcgtgatcctcgcccagctgtcggcgtttccggcctgcggcagcgtg
tggcttgaggtggtggacaccaacgatggcaaagagctgtcgaatttttgcaagaagttc
gaggcgccgttgcgcaaggctctgagccaggcgggcaagctggtcgatgatcctcgcaag
ccgcgtttgctgctgaccttcaagagtggccgcgaagtgtttctcggcatggctgacgcc
gacaactcggcaatgtggccgatgggtatcccgcgcctgaagtttccccgcgaggcaccg
agccgctcgaccctcaagctggaagaagcgtggcaccatttcattccccgagatcaatgg
gatgaacgtctttccggtgacatgaccggcgtggacctgggcgccgcgcccggtggctgg
acctaccagttggtgcgccgtggcatgctggtgacggccatcgataacggccccatggcc
gaaagtctgatggacaccggactggtgcagcatctgatggccgacggcttcacctacaag
cctcgtcagccggtggactggatggtgtgcgacgtcgtcgaaaagcctgcccgcaatgca
gcactgctggaaacctggctgggcgaaggcttgtgccgcgaagcggtggtcaacctgaaa
ctgccgatgaaacagcgctacgctgaagtgcgtcgcttgctcgaccgcatcgaagaaggc
tttcaggcgcgcggcgtgcgagtctcgatcggctgcaaacagctctaccacgaccgcgaa
gaagtcacctgccacctgcgccggctggacgtggccaaagccgcgaagcggtga
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