Pectobacterium cacticida: OI450_04690
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Entry
OI450_04690 CDS
T08693
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcac
Pectobacterium cacticida
Pathway
pcac01501
beta-Lactam resistance
pcac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OI450_04690
01503 Cationic antimicrobial peptide (CAMP) resistance
OI450_04690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcac02000
]
OI450_04690
01504 Antimicrobial resistance genes [BR:
pcac01504
]
OI450_04690
Transporters [BR:
pcac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OI450_04690
Antimicrobial resistance genes [BR:
pcac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OI450_04690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Crp
Motif
Other DBs
NCBI-ProteinID:
UYX07700
LinkDB
All DBs
Position
complement(993633..996761)
Genome browser
AA seq
1042 aa
AA seq
DB search
MAKFFIDRPIFAWVLAIMVMLAGLLAIVKLPIAQYPTIAPPAIDISANYPGADASTLQDS
VTQVIEQNMNGIDNLMYMSSSSDSSGTVQITLTFDAGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGVNVQKSSSSFLMVAAFISDDGKMSQQDIADYVAANVKDPISRTSGVGDAQLFGS
QYAMRIWLDPNKLNKYQLTAGDVSAAIRVQNNQIAAGQLGGTPPVPGQQLNASIIAQTRL
NSPEEFSNILLKVNPDGSQVRLKDVARVELGAESYDVIARYNGKPAAGIGIKLATGANAL
DTATAVKNELTKLEEFFPAGLKVVYPYDTTPFVKISINEVVKTLVEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLPPKEATKRSMEQIQGALVGIALVLSAVFIPMAFTGGSTGAIYRQFSITIVSAMVL
SVLVALILTPALCATLLKPIAKGDHGEKTGFFGWFNRIFEKSTHHYTDSVANILRSTGRY
LVIYLLIVVGLALLFLRLPTSFLPDEDQGVLLNIVQLPSGATQENTQKIMDRVANYYLEN
EKNNVNSVFTVSGFGFSGRGQNTGLAFASLKDWSQRSGAENKVQAIAGRANAVFSQYKEA
IVIAANIPAIVELGTATGFDFQLIDQANLGHEKLTEARNQLLGMAAQHPDTLVQVRPNGM
EDTPQFRLDIDQEKAQALGVSLSDISSTLATTLGGSYVNDFIDRGRVKKVYVQADAPFRM
LPDDIKNWYIRGNNGQMVPFSAFTTSHWEYGSPRLERYNGQPSMQIQGEAAPGKSTGEAM
AMMESFVAQLPQGIGYEWTGMSYQERLSGNQAPAIYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGIIGALIAANMTGLENDVYFKVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLI
EATLDAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFGKKVDGTTAH
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatagatcgacccatttttgcctgggtgctcgccatcatggtgatg
ctggcagggttgttggcaattgttaagttacctattgctcagtatccgacaatcgcgccc
ccagcgattgatatatcagcaaactatccgggtgccgatgcctcaacgctgcaagattcc
gttacgcaggttatcgagcaaaatatgaacggcatcgataacctgatgtatatgtcatct
agcagtgattcctcaggcaccgttcagattacgttaacctttgatgcgggcaccgatccg
gacatcgcgcaggttcaggtgcaaaataagttacaactggccatgccgctgctgccacag
gaagtacaacagcaaggggtaaatgttcagaaatcaagcagtagcttcctcatggttgcc
gcctttatcagtgacgacggtaaaatgtcccagcaggatatcgccgactacgtggcggca
aacgttaaagatcccatcagccgtacctctggcgtaggtgatgcacaattgttcggctcg
caatacgccatgcgtatctggttggatccaaataagctcaacaaatatcaattaaccgca
ggtgatgttagcgcggccattcgggttcaaaacaaccaaattgctgcgggacaattaggt
gggacgcctccagttcccggtcaacaattaaacgcctctatcattgcgcaaacccggctg
aattcaccggaagaattttctaacattctgttgaaagttaatccggatggttctcaggtt
cgccttaaagacgttgctcgcgtcgagctgggcgctgagagctacgacgttatagcgcgt
tataatggtaaacccgctgcgggtatcggtattaagctggcaacgggcgcaaacgcgcta
gatacagcaaccgcagtaaaaaatgagctcaccaagctggaagagttcttccctgctggc
ctgaaagtcgtatacccgtacgatacaacacctttcgtcaaaatctcgatcaacgaggtg
gtgaagacgctggtggaagctatcgtactggtattcctggtcatgtacctgttcttgcaa
aacttccgcgcgacgctgattccaacaattgccgtgcccgtcgttttactggggacgttt
gccatcctttccgcgtttggttattccattaacaccttgacgatgttcgccatggttctc
gccattggacttttagtggatgatgccatcgttgtggtagaaaacgtggaacgcgtcatg
gcggaagaaggcctgccccctaaagaagccactaaacgttccatggaacagatccaaggg
gcgttggtcggtatagctttggtcctttccgccgtgtttatcccaatggcgtttaccggc
ggctccaccggggctatctatcgccagttctccattacgattgtttctgcaatggtgcta
tcggttctggtcgcgttgattttgacgccagcgctctgtgcaacactgcttaaacctatc
gccaagggcgatcatggtgagaaaacgggcttctttggctggtttaatagaatttttgag
aaaagcacgcaccactatacggatagcgtggcgaatatccttcgcagcacaggacgttat
ctggttatctatctattaatagtagtcggcttggcgctactattcctgcgtttacccacc
tctttcctgccggacgaagaccagggggttctcctgaacatcgttcagttaccctccggt
gcaacacaggaaaatacgcagaaaattatggatagagtggcaaattattatctcgaaaat
gagaaaaataatgtcaattcagtgtttactgtctcaggctttgggttctctggtcgtggg
cagaataccggtctggctttcgccagtctaaaggactggagtcaacgcagcggggcagaa
aacaaagtccaagcaattgcgggcagagcgaatgccgtcttcagccagtataaagaagcg
attgtcatagcggctaacattccggcaatagtcgaactgggcactgcgacgggcttcgat
ttccaattgattgaccaggctaacctggggcatgaaaaactgacagaagcgcgtaaccag
ttgctgggtatggcggcgcaacaccctgatactctagtgcaggttcgtcctaatgggatg
gaagacacacctcagttccgtcttgatattgaccaggaaaaagcgcaggcgcttggtgta
tcactgtcagatatcagttcaacgttggcaacgacactgggtggttcctatgtgaatgac
tttatcgatcgcggtcgcgtgaagaaagtttatgttcaggccgatgcacctttccgtatg
ctgccggatgacattaaaaactggtacatccgtggtaataacggacaaatggtaccgttc
tctgcattcacaactagccactgggaatacggttcaccacgcttagagcgttataacggt
caaccctctatgcagatacagggcgaagcggcgccaggtaagagtaccggtgaagcgatg
gcaatgatggaaagtttcgttgcccaattaccgcaaggtattggctacgaatggacgggg
atgtcctatcaggagcgattatcagggaaccaggctcccgcgatctatgctatttcgttg
attgttgtgttcctgtgtctggcagcgctttatgaaagctggtcaatccccttctccgtc
atgctggtggttccattggggattattggtgcgctgattgcagcaaatatgacaggtctt
gaaaacgacgtttactttaaagtgggcctgttgacaaccatagggctatccgcgaaaaac
gccatattgattgtcgaatttgctaaagatctgatggaaaaagaaggtaaagggctgata
gaagcaacgctcgatgctgttcgtatgcgtcttcgcccaatcctgatgacgtcactggct
ttcatacttggcgtcatgccgttggtcatcagtagcggtgctggttccggcgctcagaac
gccgttggtaccggggtaatgggcggaatgattaccgctaccgtgctagccatattcttc
gttcccgtgttctttgttgtcgtccgccgtcgttttggtaagaaggtagacggtacgaca
gcccactag
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