Pectobacterium cacticida: OI450_07345
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Entry
OI450_07345 CDS
T08693
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pcac
Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcac03009
]
OI450_07345 (rlmC)
Enzymes [BR:
pcac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
OI450_07345 (rlmC)
Ribosome biogenesis [BR:
pcac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OI450_07345 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UYX08160
LinkDB
All DBs
Position
1538166..1539296
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AA seq
376 aa
AA seq
DB search
MHCAHYRMGTCRSCQWLEKAYPQQLSDKQQHLEGLLKPHAVQCWLPAQPSAPSACRNKAK
MVVSGSVERPLLGILHRDGTAADLCDCPLYPPSFSPVFAVLKVFIARAGLTPYHVARRRG
ELKYLLLTESTQCGTFMLRFVLRSEAKLPQLRAELPWLQQQLPQLEVISANIQPVHQAIM
EGKTEIILSDITALAEQFNQVPLYIRPQSFFQTNPQVAAALYATARDWVAELNISHMWDL
FCGVGGFGLHCASPNMRLTGIEISAEAIVCARRSAEQLGLKQVAFQALDSTQFAIGKTDI
PELVLVNPPRRGIGSELCAYLSRMAPDYILYSSCNAESMTKDMAELANYRVLRVQLFDMF
PHTAHYEVLTLLKREI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgctcactatcgtatgggaacctgccgttcctgccaatggctggaaaaagcc
tatccgcaacagttatctgacaagcagcagcatcttgaaggtctgctgaaaccgcatgct
gtgcagtgctggttgcccgcgcaaccttctgcaccatcggcatgtcgcaataaagccaaa
atggtggtgagcggcagcgtagaacgcccattactaggaatattacaccgtgatggcacc
gcggcggatctctgtgattgcccgctttatccgcccagcttttcgccggttttcgctgtc
cttaaggtttttatcgccagggcagggctgacgccatatcacgtggcgcgccgtcgtggc
gaattgaaatacctactgctgaccgaaagtacacaatgcggtacgtttatgttgcgcttt
gtcttgcgatcggaagccaagttaccccaactgcgcgccgaattaccttggttacagcag
caattgcctcagcttgaagtgatttccgccaacatccaacccgttcatcaggcgataatg
gaggggaaaacggagattatcctgagcgatattactgcgctggccgaacagttcaaccag
gtgccgttgtatatccgcccgcaaagttttttccagacgaatccacaggtggcggcagcg
ctgtatgcaacagcgcgcgactgggtcgccgaattgaacattagccatatgtgggatcta
ttttgtggtgtgggagggtttggcctgcactgcgcatcacctaacatgcgtttaaccggg
attgaaatcagcgctgaagcgatagtctgtgctcgtcgctcggcggaacagttggggcta
aaacaggtagcgtttcaggcgttggattcaacgcagttcgcgataggtaagacggacatt
cccgagctggtgctagtcaaccccccgcgccgcggtatcggcagcgaactgtgcgcttac
ttgagccgtatggcaccggactatattctctactccagctgtaatgcggaaagcatgaca
aaagatatggcggaactggcgaattaccgtgtactgcgcgttcagctattcgacatgttc
ccacacacagcacattacgaagtgctgacgttattgaagcgggaaatatag
DBGET
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