Pectobacterium cacticida: OI450_14935
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Entry
OI450_14935 CDS
T08693
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac00540
Lipopolysaccharide biosynthesis
pcac01100
Metabolic pathways
Module
pcac_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
OI450_14935 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcac01005
]
OI450_14935 (lpxC)
Enzymes [BR:
pcac01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
OI450_14935 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pcac01005
]
Lipid A
OI450_14935 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
UYX08719
LinkDB
All DBs
Position
complement(3246597..3247514)
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIDVDAPEIPIMDGSASPFVYLLLDAGI
EELNSAKKFVRIKQPVRVEDGDKWAEMKPFNGFSLDFTIDFNHPAIDAGNQRYCLNFSAE
AFVRQISRARTFGFMRDIEYLQSRGLCLGGSMDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLANQEAWEYVTFEDEAEMPLVFSAP
TSVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaacgtacattaaaacgtattgttcaggcgactggtgtcggtttgcatacc
ggcaagaaggtcacattgaccatgcgtcctgcaccggcaaataccggggtcatctatcgt
cgcacagacttgaatcccccggttgattttccggctgatgcaaaatccgtgcgtgacacc
atgctctgcacttgcctggtgaatgagcatgatgtgcgtatttctacggtggaacattta
aacgcagcgctcgcggggttgggcattgacaatattgtcattgatgtcgacgctccagaa
attcccatcatggatggcagcgccagtccgtttgtttacctgttgttagatgcgggtatt
gaagaactgaacagcgctaagaaatttgtgcgcattaaacaacccgttcgtgttgaagac
ggtgataaatgggctgaaatgaaaccctttaatggcttcagtctggatttcactattgat
ttcaatcatccggcgattgacgcgggtaaccagcgctattgtttgaatttttccgccgaa
gcgtttgttcgtcaaattagccgagcacggaccttcggtttcatgcgcgatatagaatac
ttgcagtctcgaggtttgtgcctgggcggcagtatggattgtgccatcgtcgttgacgat
tatcgtgtactgaatgaagatggtttgcgttttgaagatgagtttgttcgtcataaaatg
ctggatgcaatcggtgacttgtttatgtgcggccacaatattatcggcgcatttaccgcg
ttcaaatctggtcatgcattgaataacaaactgttacaggctgtgcttgctaatcaggaa
gcatgggaatacgtgacctttgaagacgaagcagaaatgcctttggtatttagcgctcca
acgagcgtgctggcatag
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