Physeter macrocephalus (sperm whale): 102973557
Help
Entry
102973557 CDS
T06011
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad00310
Lysine degradation
pcad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102973557 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102973557 (PRDM6)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102973557 (PRDM6)
Enzymes [BR:
pcad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
102973557 (PRDM6)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102973557 (PRDM6)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102973557 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
102973557
NCBI-ProteinID:
XP_028348965
Ensembl:
ENSPCTG00005001984
UniProt:
A0A455BJ28
LinkDB
All DBs
Position
8:120243775..120343711
Genome browser
AA seq
597 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGGGPLKGSGAAGPLGAPQPLQPPPPPERTE
PQPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAAAAAAAALAGLSALPVAQLPVFA
PLAAAAVAAEPLPPKDLCLGAASGPGPSKCGGGSGGVGVGDGRGVARFRCSAEELDYYLY
GQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELP
EWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGTVRNTQHL
WEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGT
ELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDPLQPFNKSSKLSPAAQQRS
VVFPQTPCGRNFSLLDKSGPMESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQC
FKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAF
AGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagaccccggcggctcggcattcctcaaagtggacccagcttatctg
cagcactggcagcaactcttcccgcacggcggcggcggcccgctcaagggcagcggtgcc
gcgggtcccctgggcgcaccgcagcctctccagccgcctccccccccggagcgcactgag
ccccagccggacagcctgcgcccgcggcccgcctcgctctcctccgcctcctccactccg
gcttcctcctccacctcggcctcctctgcctcctcctgcgccgcggccgccgcggccgcc
gccgccgccgcgctggccggtctctcggccctgcccgtggcgcagctgccagtgttcgcg
cctctggccgccgccgccgtcgccgcggagccgctgccccccaaggacctgtgcctcggt
gccgcctcgggcccggggccctccaagtgcggaggcggcagcggcggcgtcggcgtcggg
gatggccggggcgtcgcgcgcttccgctgcagcgcggaggagctggactattacctgtac
ggccagcagcgcatggagatcatcccgctcaaccagcacaccagcgaccccaacaaccgt
tgcgacatgtgcgcggacaaccgcaacggcgagtgccccatgcacgggccgctgcactcg
ctgcgccggctcgtgggtaccagcagcgccgcggccgccgcgccccctccggagctgccc
gagtggcttcgggacctgccacgggaggtgtgtctgtgcaccagcaccgtgcccggcctg
gcctacggcatctgcgcggcgcagaggatccagcagggcacctggattgggcccttccag
ggcgtgctcctgcccccggaaaaggtgcaggccggcaccgtgaggaacacgcagcatctc
tgggagatatatgaccaagatgggacactacagcactttattgatggtggggaacctagt
aagtcgagctggatgaggtatatccgatgtgcaaggcactgcggagaacagaatctaaca
gtagttcagtacaggtcgaatatattctaccgagcctgtatagatattcccaggggtacc
gagcttctggtgtggtacaatgacagctatacgtctttctttgggatccctttacaatgc
attgcccaggatgaaaacttaaatgtcccctcgacggtcatggaagccatgtgcagacag
gaccccctgcagcccttcaacaagagcagcaaactctcccccgccgcccagcagcgctcc
gtcgtcttcccacagactccgtgcggcaggaacttctccctcctggataagtctgggccc
atggaatcaggatttaatcaaatcaacgtgaaaaaccagcgagtccttgcaagcccgacc
tccaccagccagctccactcggagttcagtgactggcatctttggaagtgcgggcagtgc
tttaagactttcacacagaggatcctgttacagatgcacgtgtgcacgcagaaccccgac
agaccataccaatgcggccactgctcccagtccttttcccagccttcagaactgaggaac
cacgtggtcactcactccagtgaccggcctttcaaatgtggctactgtggtcgtgccttt
gctggggccaccacgctcaacaaccacatccgaacccacactggagaaaagcccttcaag
tgcgagaggtgtgagaggagcttcacgcaggccacccagctgagccgacaccagcggatg
cccaatgagtgcaagccaataaccgagagcccagaatcaatcgaagtggattaa
DBGET
integrated database retrieval system