Physeter macrocephalus (sperm whale): 102973572
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Entry
102973572 CDS
T06011
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102973572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
102973572
Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102973572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
102973572
NCBI-ProteinID:
XP_023974405
Ensembl:
ENSPCTG00005011719
UniProt:
A0A2Y9SDN9
LinkDB
All DBs
Position
12:50960378..51219885
Genome browser
AA seq
1393 aa
AA seq
DB search
MDTKLMCLLFFFSLPPLLVSNHTGRIKVVFTPSICKVTCTKGNCQNSCEKGNTTTLISEN
GHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNFTGKLCQIPVHGASVPKLYQHS
QQSGKALGTHVVHSTHTLPLTMTSQQGVKVKFPPNIVNIHVKHPPEASVQIHQVSRVDGP
TGQKVKEAQPGQSQVSYQGLPVQKTQTVHSSYSHQQVIPHVYPVAAKTQLGRCFQETIGS
QCGKALPGLSKQEDCCGTVGTSWGFHKCQKCPKKPSYHGYNQMMECLQGYKRVNNTFCQD
INECQLQGVCPNGECLNTMGSYRCTCKIGFGPDPTFSSCVPDTPVISEEKGPCYRLVSSG
RQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGGMGYTVSGVHRRRPI
HHHVGKGPVFVKPKNTQPVAKSTHPPPLPAKEEPVEALTFSREQGPGAAEPEVATVPPEK
EITSLDQEKTKLEPSQPQLSPGISTIHLRPQFPVVIEKTSPPVPVEIAPEASTSSASQVI
APTQVTEINECTVNPDICGAGHCINLPVRYTCICYDGYKFSEQQRKCVDIDECTQAQHLC
SQGRCENTEGSFLCICPAGFMASEEGTNCIDVDECLRPDVCGEGHCVNTVGAFRCEYCDS
GYRMTPGGHCEDVDECLTPSTCPDEQCVNSPGSYQCVPCTEGFRGWNGQCLDVNECLEPD
ICTNGTCSNLEGSYMCSCHKGYTPTPDHKHCKDVDECQQGNLCINGQCKNTEGSFRCTCG
QGYQLSATKDQCEDIDECQHRHLCSNGQCRNTEGSFRCVCDQGYRASALGDHCEDINECL
EDNSVCQGGDCINTEGSYDCTCPDGFQLNDNKGCQDINECEQPGLCGPHGECLNADGSFH
CVCEQGFSISADGHTCEDIDECVNNTVCDSHGFCDNTAGSFRCLCYQGFQAPQDGQGCVD
VNECELLSGVCGEAFCENVEGSFLCVCVDENQEYSPMTGQCRSRASADLEVDQPKEEKKE
CYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCPRGKGFV
PTGESSYDVDGENYKDADECLLFGQEICKNGFCLNTQPGYECYCKQGTYYDPIKLQCFDI
DECQDPNSCIDGQCVNTEGSYNCFCTHPMVLDASEKRCIRPTESHEQIEETDVYQDLCWE
HLSDEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPMKDSDDYAQLCNIPVTGRRQPY
GQDALVDFSEQYAPEADPYFIQDRFLNSFEELQAEECGILNGCENGRCVRVQEGYTCDCF
DGYHLDMAKMTCVDVNECDELNNRMSLCKNAKCINTEGSYKCVCLPGFVPSDKPNYCTPL
NTALNLEKDSDLE
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggatactaagctgatgtgtttgttgttctttttctccctgcctccactcctagtgagt
aaccacactggccgcatcaaggtggtctttactccgagcatctgtaaagtgacctgcacc
aagggcaactgtcagaacagctgtgagaaggggaacaccaccactcttattagtgagaac
ggtcacgctgccgacaccctgacagccacgaacttccgagtggtaatttgccatcttcca
tgtatgaatggaggccaatgcagttcaagggacaaatgccagtgccctccaaatttcacg
gggaagctttgtcagattcctgtccatggtgctagcgtgcctaaactttatcagcattcc
cagcagtcaggcaaggcgttgggaacacatgtcgtccactcaacacatactttgcctctg
accatgaccagccagcaaggagtcaaagtgaaatttcctcctaacatagtcaatatccac
gtgaagcaccctcctgaggcctcagtccagatacatcaggtttcaagagttgatggccca
acaggccagaaggtaaaagaagctcaaccaggccagtcccaagtctcttaccaagggctt
cctgtccagaagacccagacagtccattcctcgtactcccaccagcaagtcattcctcac
gtgtatccggtggctgctaagacgcagcttggccggtgcttccaggagactattgggtcg
cagtgtggcaaagcgcttcctggcctttcaaagcaggaggactgctgtggaaccgtgggt
acctcctggggctttcataaatgccagaaatgccccaagaagccgtcttatcatggatat
aatcaaatgatggaatgtctacaaggttataaacgggttaacaacaccttttgtcaagat
attaatgaatgccaactacagggtgtgtgccctaatggtgagtgtttgaataccatgggc
agctatagatgtacctgcaaaataggatttgggccagatcctaccttttcaagttgtgtt
ccggacacccctgtgatctctgaggagaaagggccctgttaccgacttgtcagttccgga
aggcagtgtatgcaccccctgtctgttcatctcaccaagcagctctgctgttgtagtgtg
ggcaaggcctggggcccacactgtgagaaatgtccccttccaggcacagctgcttttaag
gaaatctgtcctggtggaatgggttatacggtatctggcgttcatagacgcaggccaatc
catcaccatgtaggtaaaggacctgtatttgtcaagccaaagaacactcaacctgttgct
aaaagtactcatcctccacctctcccagccaaggaagagccagtggaggccctgaccttc
tcccgggaacaggggccaggagcggcggagccagaagtggcaactgtacctcctgagaag
gaaataacttcattggatcaagagaaaaccaaacttgagcctagtcaaccccagctctct
ccaggcatttccactattcatctgcgtccgcagtttccagtagtgattgaaaaaacatca
cctcctgtgcctgtggaaatagctcctgaagcttcaacatcaagcgccagccaagtcatt
gcacctactcaagtaacagaaatcaatgaatgtactgtgaaccctgatatctgtggagca
ggacactgcattaacctaccggtgaggtatacctgtatatgctatgatggctacaagttc
agtgagcaacagaggaaatgtgttgatattgatgaatgcactcaggcccaacacctctgc
tcccagggacgctgtgaaaacactgagggaagtttcttgtgtatttgcccagcggggttc
atggccagtgaggagggtactaactgcatagatgttgatgagtgcttgaggccagacgtc
tgtggggaggggcactgcgtcaataccgtgggggccttccggtgtgaatactgcgacagc
gggtaccgcatgacccccggaggccattgtgaggatgttgatgaatgtttgactccaagt
acttgtccagatgagcagtgtgtgaattctcctggatcttaccagtgtgttccctgcacg
gaagggttccgaggctggaatgggcagtgtcttgatgtgaatgaatgcctggaaccagat
atctgcacaaatggtacttgctccaacctcgaaggatcctacatgtgttcatgccacaag
ggctataccccaactccagaccacaagcactgtaaagatgttgacgaatgtcagcaaggg
aacctgtgcataaacgggcagtgcaaaaacaccgagggctccttcaggtgtacctgtggg
cagggctaccagctgtcagcaacaaaagaccagtgtgaagatattgatgaatgccagcac
cgtcatctctgcagtaatgggcagtgcaggaacacggagggctccttccgctgtgtttgt
gaccagggttacagagcgtccgcccttggagaccattgtgaagatatcaacgagtgcttg
gaggacaatagtgtttgccagggaggagactgcattaatactgaagggtcctatgattgt
acttgtccagatggattccagctaaatgacaataaaggatgtcaagatattaatgaatgt
gaacagcccggactctgtggtcctcatggagagtgtctaaacgcagatggttcttttcac
tgcgtctgcgagcagggtttctcaatctctgcagatggacatacatgtgaagatattgat
gaatgtgtaaacaacactgtttgtgacagtcacgggttttgtgacaatacagctggctcc
ttccgctgcctctgttatcagggctttcaggccccacaggatgggcaagggtgtgtggat
gtgaacgaatgtgagctgctcagtggcgtgtgtggtgaagccttctgtgaaaatgtagaa
gggtccttcctgtgtgtgtgcgttgatgaaaaccaggagtacagcccgatgaccgggcag
tgccgctcccgggcctcggcagacttagaagtagatcaacccaaagaagaaaagaaagag
tgctactataatctaaacgacgccagtctttgtgacaacgtgctggcccccaatgtcacc
aaacaagaatgctgctgtacctctggtgctgggtggggagataactgtgagattttcccc
tgcccagtcttggggactgctgaattcactgaaatgtgtcctagagggaaaggttttgtc
cccactggagaatcctcttacgacgttgacggcgagaactataaagatgcagatgaatgc
ctactttttggacaagaaatctgcaaaaatggcttctgtttgaacactcagcctggttat
gaatgctactgtaagcaggggacctactatgatcccatcaaattgcagtgctttgatata
gatgagtgtcaagaccccaacagttgtattgatggccagtgcgttaatacagaaggctct
tataactgcttctgtacccacccaatggtcctggatgcttcagaaaaaagatgtatccga
ccaactgaatcacatgaacaaattgaagaaaccgatgtctaccaagatctgtgctgggaa
catctcagtgatgagtatgtgtgtagccggcctcttgttggcaagcagacaacatatact
gagtgctgctgtttgtatggagaggcctggggtatgcagtgcgccctctgccccatgaaa
gattcagatgactatgcccagctgtgtaacatccccgtcacgggacgccggcagccatat
ggacaggatgccctggtcgacttcagtgaacaatacgctcccgaagctgatccctacttc
attcaggaccgttttttaaatagctttgaggagttgcaggctgaagaatgtggcatcctc
aatggctgtgaaaacgggcgctgtgtcagggtgcaggaaggttacacctgcgattgcttt
gatgggtatcacttggatatggccaagatgacctgtgttgatgtcaacgaatgtgatgag
ttgaacaaccggatgtctctatgcaagaatgccaagtgtatcaacaccgaaggttcctat
aagtgtgtgtgtctgcccggctttgtaccttccgacaagccaaactactgcactccattg
aataccgccttgaatttagaaaaagacagtgacctggagtaa
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