Physeter macrocephalus (sperm whale): 102977711
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Entry
102977711 CDS
T06011
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad00514
Other types of O-glycan biosynthesis
pcad04330
Notch signaling pathway
pcad05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102977711 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102977711 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102977711 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcad01003
]
102977711 (RFNG)
Enzymes [BR:
pcad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
102977711 (RFNG)
Glycosyltransferases [BR:
pcad01003
]
Glycan extension
O-Glycan
102977711 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
102977711
NCBI-ProteinID:
XP_007125665
Ensembl:
ENSPCTG00005019059
UniProt:
A0A2Y9FLV6
LinkDB
All DBs
Position
14:122887590..122891173
Genome browser
AA seq
334 aa
AA seq
DB search
MSRARGALCRACLALAAALAALLLLPLPLPRAPAPAPTRAPAPGPRAPPARPATAPRLRP
DDVFIAVKTTRKNHGPRLGLLLRTWISRARRQTFIFTDGDDPELQLQEGSHVVNTNCSAV
HTRQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNPEGLLQLLSTFSPSQDVYLGRPSLD
HPIEATERVQGGGTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDD
CTVGYIVEGLLGARLLHSSLFHSHLESLQRLPPDTLLQQVTLSYGGPENPHNVVNVAGGF
SLQQDPTRFKSIHCLLYPDTDWCPVQKQSDLASR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgcggggggcgctgtgccgggcctgcctcgcgctggccgcggccctggcc
gcgctgctgctgctgccactgccgctaccccgcgcgcccgcgccggccccgacccgggcc
ccagcccccggcccacgcgctccccctgcccggcccgccaccgccccccgcctgcggccc
gacgacgtcttcatcgcggtcaagaccacccggaagaaccacgggccgcgcctagggctg
ctgctgcgcacctggatctcccgggcccgacggcagacgttcatctttaccgacggggat
gaccctgagctacagctccaggaaggcagccacgtcgtcaacaccaactgctcagccgtg
cacacacgccaggctctgtgctgcaagatgtcagtggaatacgacaagttcatcgagtct
ggacgcaagtggttctgccatgtggacgatgacaactacgtgaaccccgaaggcctgctg
cagctgctgtccaccttctcacccagccaggacgtctacctggggcggcccagcctggac
caccccatcgaggctaccgagagggtccaaggaggtggaaccgtgaccacagtcaagttc
tggtttgctaccggaggggccgggttctgcttgagcagaggccttgcactcaagatgagc
ccgtgggccagcctgggcagtttcatgagcacagccgagcgggtgcggctgccagatgac
tgcacggtgggctacattgtggaggggctgctgggcgcccgcctgctgcacagctcactg
ttccactcccacctggagagcctgcagaggctgccgcccgacaccctgctccagcaggtc
accttaagctacgggggtcctgagaacccacataatgtggtgaacgtggccggaggcttc
agcctgcagcaggaccccacgcggtttaagtccatccactgccttctttacccggacacg
gactggtgtcctgtgcagaagcagagtgacctcgcctctcggtga
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