Physeter macrocephalus (sperm whale): 102979844
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Entry
102979844 CDS
T06011
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04064
NF-kappa B signaling pathway
pcad04210
Apoptosis
pcad04668
TNF signaling pathway
pcad05200
Pathways in cancer
pcad05202
Transcriptional misregulation in cancer
pcad05203
Viral carcinogenesis
pcad05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102979844 (TRAF1)
04668 TNF signaling pathway
102979844 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102979844 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102979844 (TRAF1)
05202 Transcriptional misregulation in cancer
102979844 (TRAF1)
05203 Viral carcinogenesis
102979844 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
102979844 (TRAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
XLF_CC
MIC19_MIC25
DUF6185
Motif
Other DBs
NCBI-GeneID:
102979844
NCBI-ProteinID:
XP_007123691
Ensembl:
ENSPCTG00005017714
UniProt:
A0A2Y9FI61
LinkDB
All DBs
Position
9:5096917..5128784
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AA seq
415 aa
AA seq
DB search
MASGSASSPRPAPDENEFPFGCPPTVCQDPPEPRPLCCTVCLSENVRNGEDRICPKCKGD
DTPSERPGSLLSQEQDHPEVAEAGVGCPFAGVGCSFKGGPKFMQEHEVTSQASHLNLLLG
FMKQWKAQLGSGLGSGPVALERNLSDLQLQGAVEAAGDLEVDCYRAPCSESQEELALQHF
MKEKLLTELEGKLCVFENIVAVLNKEVEASHLALAASIHQSRLDREHILSLERRVVELQQ
TLAQKDQALGKLEQSFRLMGEASYDGTFLWKVTSVTRRCHESACGRTVSLFSPAFYTAKY
GYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDA
FRPDLNSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETNA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggctcagccagcagcccccgcccggcccccgatgagaacgagttccccttt
gggtgcccccccaccgtctgccaggacccaccagagcccaggcccctctgctgcaccgtc
tgtctctctgagaacgtgaggaatggtgaggatcggatctgtcccaaatgcaaaggggat
gacacaccgtccgaaaggccaggaagccttctgtctcaggagcaggatcaccccgaggtg
gctgaggctggagttgggtgtccctttgcaggtgttggctgctccttcaaggggggccca
aagttcatgcaggagcatgaggtcacctcccaggccagccatctgaacctgctgttaggg
ttcatgaaacagtggaaggcccagctgggctctggcctggggtctgggcccgtggccctg
gagcggaatctgtcagacctgcagctgcagggggctgtggaggcagctggggacctagag
gtggactgctaccgggccccctgctccgagagccaggaggagctggccctgcagcacttc
atgaaggagaagctcctgactgagctggaggggaagctgtgcgtgtttgagaacattgtt
gccgtcctcaacaaggaggtggaggcctcgcacctggccctggccgcctccatccaccag
agccggctggaccgtgagcacatcctgagcttggaacggagggtggtggagctgcagcag
accttggcccagaaagaccaggccctgggcaagctggagcagagcttccgcctcatggga
gaggcctcctacgacggcaccttcctatggaaggtcaccagtgtcaccaggcggtgccat
gaatcagcctgcggcaggaccgtcagcctcttctccccagctttctacactgccaagtac
ggatacaagttgtgcctgcggctctacctgaatggggacgggacggggaagaggacccac
ctgtccctcttcatcgtgatcatgagaggggagtatgatgctctgctgccgtggcctttc
cggaacaaggtcactttcatgctgctcgaccagaacaaccgtgagcacgccatcgacgcc
ttccggcccgacctgaactcagcatccttccagcggccccagagtgaaaccaatgtggcc
agcggctgcccgctcttcttccccctcaacaagctgcagtcacccaagcatgcctacgtg
aaggacgacaccatgttcctcaagtgcatcgtggagacaaacgcttag
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