Physeter macrocephalus (sperm whale): 102983217
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Entry
102983217 CDS
T06011
Symbol
MMP13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04657
IL-17 signaling pathway
pcad04926
Relaxin signaling pathway
pcad04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
102983217 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
102983217 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
102983217 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcad01002
]
102983217 (MMP13)
Peptidases and inhibitors [BR:
pcad01002
]
Metallo peptidases
Family M10
102983217 (MMP13)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
102983217
NCBI-ProteinID:
XP_007103870
Ensembl:
ENSPCTG00005007790
UniProt:
A0A2Y9EJT8
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Position
16:30421752..30432432
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AA seq
471 aa
AA seq
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MHPGVLAAFFFLSWTHCLSLPLPNDEDSDDLSEEDFQFAENYLKSYYYPLNPAGILKKTA
ASSVVDRLREMQSFFGLEVTGRLDDNTLDIMKKPRCGVPDVGEYNVFPRTLKWSKMNLTY
RIVNYTPDLTHSEVEKAFKKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDG
PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALM
FPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLSLDAITSLRGET
MIFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHPSHDLIFIFRGRKFWALNGY
DILEGYPRKISELGFPKEIKKISAAVHFEDTGKTLFFSGNQVWSYDETNRVMHNDYPRPI
EEDFPGIGDKVDAVFEKNGYIYFFNGPIQFEYSIWSNRIVRVMPTNSLLWC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcacccaggtgtcctggctgccttcttcttcttgagttggactcattgtttgtccctg
cctcttcccaatgatgaagattctgacgatttgtccgaggaagacttccagtttgcagag
aactacctgaaatcatactactatcctctgaatcctgctggaatcctgaagaagacggca
gcaagctctgtggttgacaggcttagagaaatgcagtctttttttggcttagaggtgacg
ggaagacttgatgataacaccttagacatcatgaaaaaaccaagatgtggcgtccctgat
gtgggtgaatataatgtttttcctcgaactctcaaatggtccaaaatgaacttaacctac
agaattgtgaattatacccctgatttgactcattctgaagttgaaaaggcattcaaaaaa
gcctttaaagtttggtctgatgtgacacctctgaattttaccagaattcacaatggcact
gcggatatcatgatctcttttggaactaaagagcatggtgacttctacccatttgatgga
ccctctggtctattggctcacgcttttcctcctggaccaaattatggaggagatgcccat
tttgatgatgatgaaacctggacaagtagttccaaaggctacaacttgtttcttgttgct
gcccatgagtttggccattccttaggtcttgaccactccaaggacccaggggcactcatg
tttcccatatatacctacactggcaaaagccactttatgcttcctgatgatgatgtacaa
gggatccagtctctctatggcccaggagatgaagaccccaaccctaaacatcccaaaacg
ccagacaaatgtgatccttccttatcccttgatgccattaccagtctccgaggagaaaca
atgatctttaaagacagattcttctggcgtctgcatcctcagcaggttgacgcagagctg
tttttaacaaaatccttttggccagaacttcccaaccgtattgatgctgcatatgagcac
ccttcccatgaccttatcttcatctttagaggcagaaaattttgggctcttaatggttac
gatattctggaaggttatcccagaaaaatatccgaactgggatttccaaaagagattaaa
aagataagtgcagccgttcactttgaggatacagggaagacgctcttcttctcaggaaac
caagtctggagctatgatgaaactaaccgtgtgatgcataatgattaccccagaccaata
gaagaggacttcccaggaattggtgataaagtagatgctgtcttcgagaaaaatggttat
atctattttttcaatgggcccatacagtttgaatacagcatctggagtaaccgtattgtt
cgtgtcatgccaacaaattccttattgtggtgttaa
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