KEGG   Physeter macrocephalus (sperm whale): 102983741
Entry
102983741         CDS       T06011                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03250  Viral life cycle - HIV-1
pcad05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102983741
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102983741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102983741
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102983741
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N APOBEC3 SNAD4 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 MafB19-deam Pox_E10 AID
Other DBs
NCBI-GeneID: 102983741
NCBI-ProteinID: XP_023983202
Ensembl: ENSPCTG00005008353
UniProt: A0A2Y9T113
LinkDB
Position
6:complement(44280859..44293300)
AA seq 420 aa
MEPQRPRQRAGLGLASKGGCSQRPRIRNPVERLDRQTFSFHFRNLRYANGRNCSYLCYQV
ERLKHCSPDSSDWGVFQNQAYPENRCHAELCFLSWFRSKKLSPYEQYHITWFLSWSPCLS
CAEQVAAFLMENRNVRLSIFAARLYYFWKPECQRGLRVLHHQRASVRIMSFREFKYCWKN
FVYNQGMPFKPWKKLRKNYQFLVAKLQEILGNTMNLLKTKIFKQQFGNQHRVPQPRYRRK
TYLCYQLKQLDGFTLDKGCFRNKKQRHAEIRFIDKITSLNLDPNQSYEITCYVTWSPCPT
CARELVDFINGQNHLSLQIFASRLYFHWVKLFQRGLQQLQAAQVSVAVMTRSEFEECWEE
FVDNQGMPFESWDKLEQYSESISRRLQKILSPSNWNNLENSFRDLRLGSPSPLLLRSDSR
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggagccccagcgcccgagacaaagggcagggctgggactagccagcaaaggaggctgc
agccagaggccccggatcagaaacccagtggagcggttagatcgccaaaccttctccttc
cactttcgcaacctgagatatgccaatgggcggaactgctcctacctctgctaccaggtg
gaaaggctgaagcactgctcacctgactcctccgactggggggtctttcaaaaccaggcc
tatcccgagaatcgctgccacgcggaactctgcttcctctcttggtttcgctccaagaag
ctgtccccttacgagcagtaccacatcacctggttcttatcctggagcccctgcttgtca
tgtgcagagcaggtggctgcgttcctgatggagaacaggaacgtgaggctgagcatcttc
gccgcccgcctctactacttctggaaaccagagtgccagcgcgggctgcgcgtgctgcac
caccagagggcctctgtgcgcatcatgtccttccgagagtttaaatactgttggaaaaac
tttgtgtacaatcagggaatgcccttcaagccttggaagaaactgcgtaaaaattatcag
ttcctggtggcaaagcttcaggaaattctcggaaacacaatgaatctgctaaaaacaaaa
atattcaaacaacagtttggcaaccagcaccgggtcccacagccccgctaccggaggaag
acctatttgtgctaccagctgaagcagctcgacggcttcacgcttgacaaaggctgcttc
cgaaacaagaaacaacgacatgcagaaattcgctttattgacaagatcacctcgctgaat
ctcgacccaaaccagagctacgaaatcacctgctatgtcacgtggagcccttgccctacc
tgtgccagggaactggttgatttcatcaacggtcagaaccacctgagcctgcagatcttt
gcctcccgcttgtacttccactgggtcaagctgtttcagagggggctgcagcagctacag
gcagcccaggtctcagtggctgtcatgacccgctcagagtttgaagaatgctgggaagaa
tttgtggataaccaggggatgcccttcgagtcctgggataagctggagcaatacagcgag
agcataagccgtcggctccagaagatcctgtcgccctcgaattggaataatttagagaat
tccttcagagacttgagacttggatccccatcccctttgttgttaagaagtgactcaaga
tga

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