Physeter macrocephalus (sperm whale): 102984457
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Entry
102984457 CDS
T06011
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03272
Virion - Hepatitis viruses
pcad04144
Endocytosis
pcad04913
Ovarian steroidogenesis
pcad04925
Aldosterone synthesis and secretion
pcad04927
Cortisol synthesis and secretion
pcad04934
Cushing syndrome
pcad04976
Bile secretion
pcad04979
Cholesterol metabolism
pcad05145
Toxoplasmosis
pcad05160
Hepatitis C
pcad05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
102984457 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102984457 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
102984457 (LDLR)
04925 Aldosterone synthesis and secretion
102984457 (LDLR)
04927 Cortisol synthesis and secretion
102984457 (LDLR)
09154 Digestive system
04976 Bile secretion
102984457 (LDLR)
04979 Cholesterol metabolism
102984457 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
102984457 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
102984457 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102984457 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
102984457 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102984457 (LDLR)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
102984457 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
EGF_LRP2
hEGF
Motif
Other DBs
NCBI-GeneID:
102984457
NCBI-ProteinID:
XP_007106738
Ensembl:
ENSPCTG00005013209
UniProt:
A0A2Y9ER63
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MRLAGCGLRWAVTLLIAATAGAVEDKCGRNEFQCRDGTCISYKWVCDGSAECQDGSDESQ
ETCMSVTCKTGDFSCGGRVNRCIPESWRCDGQLDCENGSDEEGCPPKTCSQDEFRCSDGK
CIAPKFVCDLDLDCLDGSDEVSCPAPTCGPASFQCNSATCIPELWACDGDPDCEDGSDEW
PQRCGDPQPSAPAQGNNPCSALEFHCRSGECIHSSWHCDHDPDCKDKSDEENCAVATCRP
DEFQCLDGTCIHGSRQCDREYDCKDQSDELGCINVTLCEGPNKFKCQSGECISLDKVCNS
VRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQLVDKHRCEDIDEC
QDPDACSQLCVNLEGSYKCQCEEGFQLEPLTKACKAVGTIAYLFFTNRHEVRKMTLDRSE
YTSVIPNLKNVVALDTEVASNRIYWSDLSQRKIYSAQINRAPSFSSYDTVISEDLQAPDG
LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFQEKGSKPRAIVVDPVHGFMYWTDWGT
PAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVTGGNRKTV
LEDKKKLAHPFSLAIFEDKVFWTDIVNEAIFSANRLTGSDINLMAENLLSPEDIVLFHNL
TQPRGVNWCERTALRNGGCQYLCLPAPQINPRSPRFTCACPDGALLAKDMRSCLAGGGTS
LPSATLAETEPAVTTWRPSTVNSTTVGPKRTASPELTTAESVTMSQQVLGDVASRADAER
PQGVGALYIVLPIALLILLCFGTFLLWKNWRLKSIHSINFDNPVYQKTTEDEVHICRSQD
GYTYPSRQMVSLEDDVA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgcgggctgcgggctgcgctgggccgtcaccctgctcatcgctgcgacggcg
ggtgcagtggaagacaaatgtgggagaaatgaattccagtgccgagatgggacgtgcatc
tcctacaagtgggtttgcgacgggagcgctgagtgccaggacggctccgatgaatcccag
gagacgtgcatgtctgtcacctgcaagacgggggacttcagctgtgggggccgtgtcaat
cgctgcattcctgagtcctggagatgcgatggccagctggactgcgagaacggctcagac
gaggaaggctgtccccccaagacgtgctcccaggacgagttccgctgcagtgacggcaag
tgcatcgccccgaagttcgtctgcgacttggacctggactgcttagacggctcagacgag
gtgtcctgccctgcgcccacgtgcggccctgccagcttccagtgcaacagcgccacctgc
atccccgagctctgggcctgcgacggcgaccccgactgtgaagacggctcggatgagtgg
ccacagcgctgcggggacccccagccatcggcccccgcacagggcaacaacccctgctcg
gccctcgagttccactgccgcagcggcgaatgcatccactccagctggcactgcgaccac
gaccccgactgcaaggacaagtctgacgaggagaactgtgctgtggccacctgccggcct
gacgagttccagtgcttggatgggacctgcatccatggcagccggcagtgcgacagggag
tatgactgtaaggaccagagcgacgagctgggctgcatcaatgtgactctgtgtgaggga
cccaacaagttcaagtgccaaagcggcgagtgcatatccctggacaaagtgtgcaactca
gtcagggactgccgggactggtcggatgaacccctcaaggagtgcgggaccaacgagtgt
ctggataacaagggcggctgctcccacatctgcaacgacctcaagatcggctacgagtgc
ctttgtcctgagggcttccagctggtggacaagcacagatgtgaagatatcgacgagtgt
caggaccccgacgcctgcagccagctctgcgtgaacctcgagggcagctacaagtgccag
tgtgaggagggcttccagctggagcccctcaccaaggcctgcaaggccgtgggcaccatc
gcctacctcttcttcaccaaccgccacgaagtgaggaagatgactctggaccgcagcgag
tacaccagcgtcatccccaacctgaagaacgtggtcgccctggacacggaggtggccagc
aacagaatctactggtccgacctgtcccagaggaagatctacagcgcccagatcaacaga
gcccccagcttctcttcctacgacactgtcatcagcgaggatctccaggcccccgacggg
ctggcagtggattggatccacagcaacatatactggactgactccgtcctgggcaccgtc
tcagtggccgacaccaagggtgtgaagaggaagacgctcttccaagagaaaggctccaag
ccacgggccattgtggtggatcccgtccacggcttcatgtactggacggactggggaacc
cccgccaagatcaagaaggggggcctgaatggcgtggacgtttactcgctggtgacggag
gacatccagtggcccaatggcatcaccctggatctttccagcggccgcctatactgggtc
gactccaagctgcactccatctccagcattgatgtcaccgggggcaaccggaagaccgtg
ctggaggacaagaagaagctggcgcaccccttctccttggccatctttgaggataaagta
ttttggacggatattgtcaacgaagccatcttcagtgccaaccgcctcacgggctcggac
attaatttgatggcagaaaacctgctgtctccagaggacatcgtccttttccacaacctc
acgcagccaagaggggtgaactggtgtgagaggactgccctccgcaacggtggctgccag
tacctgtgtctgccagccccgcagatcaacccccgctcgcccaggttcacctgtgcctgc
cccgacggcgcgctgctggccaaggacatgagaagctgccttgcaggtgggggcaccagt
ctgccttctgccacccttgcagagactgaacctgcagtgaccacctggaggccctccacg
gtcaactcaacaaccgtggggccgaagcgcacagccagtcctgagctcaccacggcagag
tcagtgacgatgtcccaacaagtcctgggtgatgttgccagccgagcggacgcggagagg
ccccagggcgtgggtgctctgtacatcgtcctcccaatcgcgctgctcatcctcctgtgc
ttcgggaccttcctcctctggaagaactggcggcttaagagcatccacagcatcaacttt
gacaaccctgtgtaccagaagaccacggaggacgaggtccacatctgccgcagccaggat
ggctacacctacccctcgagacagatggtcagcctagaggatgacgtggcgtga
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