Physeter macrocephalus (sperm whale): 102990097
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Entry
102990097 CDS
T06011
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04060
Cytokine-cytokine receptor interaction
pcad04061
Viral protein interaction with cytokine and cytokine receptor
pcad04062
Chemokine signaling pathway
pcad04064
NF-kappa B signaling pathway
pcad04360
Axon guidance
pcad04670
Leukocyte transendothelial migration
pcad04672
Intestinal immune network for IgA production
pcad04810
Regulation of actin cytoskeleton
pcad05163
Human cytomegalovirus infection
pcad05200
Pathways in cancer
pcad05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102990097 (CXCL12)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102990097 (CXCL12)
04061 Viral protein interaction with cytokine and cytokine receptor
102990097 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102990097 (CXCL12)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102990097 (CXCL12)
04672 Intestinal immune network for IgA production
102990097 (CXCL12)
04062 Chemokine signaling pathway
102990097 (CXCL12)
09158 Development and regeneration
04360 Axon guidance
102990097 (CXCL12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102990097 (CXCL12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
102990097 (CXCL12)
09163 Immune disease
05323 Rheumatoid arthritis
102990097 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pcad04052
]
102990097 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
pcad00536
]
102990097 (CXCL12)
Cytokines and neuropeptides [BR:
pcad04052
]
Cytokines
Chemokines
102990097 (CXCL12)
Glycosaminoglycan binding proteins [BR:
pcad00536
]
Heparan sulfate / Heparin
Chemokines
102990097 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
102990097
NCBI-ProteinID:
XP_028342466
Ensembl:
ENSPCTG00005011432
UniProt:
A0A455BET3
LinkDB
All DBs
Position
Unknown
AA seq
89 aa
AA seq
DB search
MDAKIVAVLALVLAALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNK
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaagatcgtcgctgtgctggccctcgtgctggctgcgctgtgcctcagcgac
gggaaaccagtcagcctgagctacagatgcccttgccgattctttgagagccacgtcgcc
agagccaatgtcaagcatctcaaaatcctgaacactccaaattgtgcccttcagatcgtg
gcaaggctgaagaacaacaatagacaagtgtgcatcgacccgaaattgaagtggattcag
gaatacctggagaaagctttaaacaagtaa
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integrated database retrieval system