Physeter macrocephalus (sperm whale): 102996312
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Entry
102996312 CDS
T06011
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X3
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad02010
ABC transporters
pcad04146
Peroxisome
pcad04977
Vitamin digestion and absorption
pcad04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102996312 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102996312 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
102996312 (ABCD4)
04980 Cobalamin transport and metabolism
102996312 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102996312 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcad02000
]
102996312 (ABCD4)
Enzymes [BR:
pcad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
102996312 (ABCD4)
Membrane trafficking [BR:
pcad04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
102996312 (ABCD4)
Transporters [BR:
pcad02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
102996312 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
SbmA_BacA
AAA_22
AAA_29
nSTAND3
AAA_7
T2SSE
RsgA_GTPase
AAA_23
CoV_E
Motif
Other DBs
NCBI-GeneID:
102996312
NCBI-ProteinID:
XP_007117153
Ensembl:
ENSPCTG00005022592
UniProt:
A0A2Y9F8T5
LinkDB
All DBs
Position
11:complement(154569588..154599228)
Genome browser
AA seq
606 aa
AA seq
DB search
MAVRGPAPRADARPRLDLQFFQRFLQIQKVLFPSWSSQNALMFLTLLCVALLEQLVIYRV
GLIPSQYFGVLGNKDLSGFKTLTFLAVVLIVLNSMLKSFDQFTCNLLYVSWRKDLTEHLH
RLYFRGRVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLVYYTYQCFQ
STGWLGPVSIFGYFLLGTVVNKMLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFFR
AGHVEHVRTDRRLQRLLQTQRELMSKELWLYIGVNMFDYLGSILSYVVISIPIFSGIYGD
LSPTELSTLVSKNAFVCMYLISCFTQLIDLSTTLSDVAGYTHRIGELQETLLDMTLKSQD
GEILDESEWDLARAPGWPATERTDTAFLLERVCISAPSSNKPLIKNLSLKISEGQSLLIT
GNTGTGKTSLLRVLGGLWESTWGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKE
IYPDSGSADDERIMRFLELAGLSGLVARTEGLDQQVDWNWYDVLSPGEMQRLSFARLFYL
QPKYAVLDEATSALTEEVESELYRIGQQLGMTFVSVGHRRSLEKFHSLVLKLCGEGRWEL
TRIKVE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccgggggcccgcaccccgggctgacgccaggcccaggttagatctgcaattt
ttccagcggttcctgcagatacagaaggttttgtttccctcttggtcatcacagaatgcc
ttgatgttcctgacccttttgtgtgtggccctactggaacaactggtgatctaccgggtt
ggcttgattcccagtcagtactttggggtcctaggaaacaaagatttaagtgggtttaag
accctgacgttcctggctgttgtgctcatcgtcctcaactccatgctgaagagctttgac
cagttcacctgcaacctgctgtatgtgagctggaggaaggacctcaccgagcacctccac
cgcctctacttccggggccgcgtgtactacaccctcaacgtgctgcgggatgacatcgat
aacccggaccagcgcatcagccaggacgtggagcggttctgccggcagctcagcagcatg
gccagcaagctgatcatctcccccttcaccctcgtctactacacctatcagtgcttccag
agcaccggctggctcgggcctgtgagcatctttgggtatttccttctgggaaccgtggtg
aacaaaatgttgatgggtcccattgtggcaaagctggtgcagcaggagaagctggagggg
gatttcaggttcaagcacatgcagatccgggtgaatgctgagcctgctgcttttttcaga
gctgggcatgtggagcacgtgaggacagaccgcaggctgcagagactccttcagacccag
agggagctgatgtccaaggagctctggctgtacatcggcgtcaacatgtttgactatctg
ggcagcatcctgagttacgtcgtgatctcaatccccattttcagcggcatctacggagac
ctgagccccacagagctcagcaccctggtcagcaagaacgcctttgtgtgcatgtacctc
atcagctgcttcacccagctcatcgatctgtccaccacgctctccgatgtggcaggctac
acacacagaatcggggaacttcaggagaccctgctggacatgaccctgaagtcacaggat
ggggaaatcctggacgagagcgagtgggacttggccagggccccgggatggccagcaaca
gagagaacagatacagcttttctccttgagcgtgtctgcatctccgccccctcgtctaac
aaacccttaatcaagaatctgagcctgaagatctctgaggggcagagcttgcttatcaca
ggcaacacgggcaccggcaagacctccttgctccgggttctgggtggcctctgggagagc
acatggggctcagtgcagatgctgacggactttggaccccacggggtgctgttcctgcca
caaaagccattcttcactgacgggacccttcgggagcaggtgatatatcccttgaaggag
atctaccccgactcaggttctgctgatgatgagaggatcatgaggttcctggagttggca
ggcctgtccggcttggtggcaaggacagagggtctggaccagcaggtcgattggaactgg
tatgatgttctgtccccaggagagatgcagaggctctcctttgcccggctcttctacctg
cagccgaagtacgcagtgcttgatgaagccaccagtgccctgaccgaggaggtggagagc
gagctctaccgcatcggccagcagctgggcatgacgttcgtcagcgtgggccatcggcgc
agccttgagaagtttcactccttggttctgaaactctgtggagaaggaaggtgggagctg
accagaatcaaagtggaatga
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