Physeter catodon (sperm whale): 102996515
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Entry
102996515 CDS
T06011
Symbol
NR1H4
Name
(RefSeq) bile acid receptor
KO
K08537
farnesoid X receptor
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
102996515 (NR1H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102996515 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcad03310
]
102996515 (NR1H4)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102996515 (NR1H4)
Nuclear receptors [BR:
pcad03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
102996515 (NR1H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102996515
NCBI-ProteinID:
XP_007103428
Ensembl:
ENSPCTG00005011367
UniProt:
A0A2Y9EIE5
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All DBs
Position
6:33623723..33669087
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AA seq
482 aa
AA seq
DB search
MVMQFPELENPGQISPCHSCTSLGFAMEMMTMKPAKGVLTEQAAGPLGQNLEVEPYSQYN
NIQFPQVQPQISSSSYYSNLGFYPQQPEEWYSPGIYELRRMPAEPLYQEETEVVEIPVTK
KARLGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCV
MDMYMRRKCQECRLRKCKEMGMLAECLLTDIQCKSKRLRKNVKQHADQTINEDSEGRDLR
QVTSTTKSCREKTELTPDQQNLLHYIMDSYSKQRMPQEITNKILKEEFSAEENFLILTEM
ATSHVQILVEFTKKLPGFQALDHEDQIALLKGSAVEAMFLRSAEIFSKKLPAGHADLLEE
RIRKSGISDEYITPMFSFYKSVAELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEP
LLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWD
VQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggttatgcagtttccagagttagaaaatccaggtcaaattagtccttgtcacagctgc
acgtcgttgggatttgccatggaaatgatgaccatgaagcctgctaaaggtgtactaaca
gaacaagcagcaggtcctctgggacagaatctagaagtggaaccatactcacaatacaac
aacattcagtttccccaagttcaaccacagatttcctcatcttcctattattccaacctg
ggtttctatccccagcagcctgaagagtggtactctcctggaatatatgaactcaggcga
atgcctgctgagcctctctaccaggaagagactgaggtagtggagattcctgtgacaaag
aaggcccgactgggtgcatcagcagggagaataaaaggggatgagctatgtgttgtttgt
ggagacagagcatctggttaccactataatgcactgacctgtgaggggtgcaaaggtttc
ttcaggagaagcattaccaaaaatgctgtgtacaagtgtaaaaacgggggcaactgtgtg
atggacatgtacatgcgaagaaagtgccaagagtgtcgactaaggaaatgcaaagagatg
ggaatgttggctgaatgcttgttgactgacattcagtgtaaatctaaaagactgaggaaa
aacgtgaagcagcacgcagatcagaccattaatgaagacagtgaaggacgtgacttgcga
caagtgacctcgacaactaagtcatgcagggagaaaactgaactcaccccagatcaacag
aatcttcttcattatattatggattcatacagcaagcagaggatgcctcaggaaataaca
aataaaattttaaaagaagaattcagtgcagaagaaaattttctcattttaactgaaatg
gctaccagtcatgtacagattctcgtagaattcacaaaaaaactgccagggtttcaggca
ttggaccatgaagatcagattgctttgctgaaagggtctgcagttgaagctatgtttctc
cgttcagctgagattttcagtaagaaacttccagctggacatgctgacctattggaagag
agaattcgaaagagcggtatctctgatgaatatataacgcctatgtttagtttttataaa
agtgttgcagaattgaaaatgactcaagaagagtatgctctgcttacagcaattgttatt
ctctcgccagacagacaatacataaaggacagagaggcagtagagaagcttcaggaacca
ctgcttgatgtgctacaaaagttgtgtaagattcatcagcctgaaaatcctcaacatttt
gcttgtcttctgggtcgcctgactgagttgcggacattcaaccatcaccacgcagagatg
cttatgtcatggagggtgaatgaccacaagtttaccccgcttctctgtgaaatctgggat
gtgcagtga
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