Physeter catodon (sperm whale): 112064697
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Entry
112064697 CDS
T06011
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03420
Nucleotide excision repair
pcad04066
HIF-1 signaling pathway
pcad04110
Cell cycle
pcad04114
Oocyte meiosis
pcad04120
Ubiquitin mediated proteolysis
pcad04141
Protein processing in endoplasmic reticulum
pcad04310
Wnt signaling pathway
pcad04350
TGF-beta signaling pathway
pcad04710
Circadian rhythm
pcad05170
Human immunodeficiency virus 1 infection
pcad05200
Pathways in cancer
pcad05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112064697
04120 Ubiquitin mediated proteolysis
112064697
09124 Replication and repair
03420 Nucleotide excision repair
112064697
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112064697
04350 TGF-beta signaling pathway
112064697
04066 HIF-1 signaling pathway
112064697
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112064697
04114 Oocyte meiosis
112064697
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
112064697
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112064697
09162 Cancer: specific types
05211 Renal cell carcinoma
112064697
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
112064697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
112064697
03400 DNA repair and recombination proteins [BR:
pcad03400
]
112064697
Enzymes [BR:
pcad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
112064697
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
112064697
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
112064697
Cul2 complex
112064697
Cul3 complex
112064697
Cul4 complex
112064697
Cul7 complex
112064697
Cul8 complex
112064697
Cul9 complex
112064697
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112064697
TCR (transcription coupled repair) factors
Cul4-CSA complex
112064697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112064697
NCBI-ProteinID:
XP_054941125
Ensembl:
ENSPCTG00005009647
UniProt:
A0A9W2WP81
LinkDB
All DBs
Position
6:11487014..11487960
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSSTNSGAGKKGFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgtggataccccgagcagcacgaacagcggcgcgggcaagaag
ggctttgaagtgaaaaagtggaatgcggtagctctctgggcctgggatattgtggttgat
aactgtgccatctgccggaaccacattatggatctttgcatagagtgtcaagccaaccag
gcgtctgctacttctgaagagtgcaccgttgcgtggggagtctgtaaccatgcttttcac
ttccactgcatctcccgctggctcaaaacacggcaggtgtgtccgttggacaacagagag
tgggaatttcaaaaatatgggcactag
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integrated database retrieval system