KEGG   Physeter catodon (sperm whale): 112064697
Entry
112064697         CDS       T06011                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad03420  Nucleotide excision repair
pcad04066  HIF-1 signaling pathway
pcad04110  Cell cycle
pcad04114  Oocyte meiosis
pcad04120  Ubiquitin mediated proteolysis
pcad04141  Protein processing in endoplasmic reticulum
pcad04310  Wnt signaling pathway
pcad04350  TGF-beta signaling pathway
pcad04710  Circadian rhythm
pcad05170  Human immunodeficiency virus 1 infection
pcad05200  Pathways in cancer
pcad05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112064697
   04120 Ubiquitin mediated proteolysis
    112064697
  09124 Replication and repair
   03420 Nucleotide excision repair
    112064697
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    112064697
   04350 TGF-beta signaling pathway
    112064697
   04066 HIF-1 signaling pathway
    112064697
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    112064697
   04114 Oocyte meiosis
    112064697
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    112064697
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    112064697
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    112064697
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    112064697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcad04121]
    112064697
   03400 DNA repair and recombination proteins [BR:pcad03400]
    112064697
Enzymes [BR:pcad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     112064697
Ubiquitin system [BR:pcad04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   112064697
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     112064697
   Cul2 complex
     112064697
   Cul3 complex
     112064697
   Cul4 complex
     112064697
   Cul7 complex
     112064697
   Cul8 complex
     112064697
   Cul9 complex
     112064697
DNA repair and recombination proteins [BR:pcad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      112064697
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      112064697
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 112064697
NCBI-ProteinID: XP_054941125
Ensembl: ENSPCTG00005009647
UniProt: A0A9W2WP81
LinkDB
Position
6:11487014..11487960
AA seq 108 aa
MAAAMDVDTPSSTNSGAGKKGFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcagcacgaacagcggcgcgggcaagaag
ggctttgaagtgaaaaagtggaatgcggtagctctctgggcctgggatattgtggttgat
aactgtgccatctgccggaaccacattatggatctttgcatagagtgtcaagccaaccag
gcgtctgctacttctgaagagtgcaccgttgcgtggggagtctgtaaccatgcttttcac
ttccactgcatctcccgctggctcaaaacacggcaggtgtgtccgttggacaacagagag
tgggaatttcaaaaatatgggcactag

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