KEGG   Physeter macrocephalus (sperm whale): 129391324
Entry
129391324         CDS       T06011                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03420  Nucleotide excision repair
pcad04066  HIF-1 signaling pathway
pcad04110  Cell cycle
pcad04114  Oocyte meiosis
pcad04120  Ubiquitin mediated proteolysis
pcad04141  Protein processing in endoplasmic reticulum
pcad04310  Wnt signaling pathway
pcad04350  TGF-beta signaling pathway
pcad04710  Circadian rhythm
pcad05170  Human immunodeficiency virus 1 infection
pcad05200  Pathways in cancer
pcad05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129391324 (RBX1)
   04120 Ubiquitin mediated proteolysis
    129391324 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129391324 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    129391324 (RBX1)
   04350 TGF-beta signaling pathway
    129391324 (RBX1)
   04066 HIF-1 signaling pathway
    129391324 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129391324 (RBX1)
   04114 Oocyte meiosis
    129391324 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    129391324 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    129391324 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    129391324 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    129391324 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcad04121]
    129391324 (RBX1)
   03400 DNA repair and recombination proteins [BR:pcad03400]
    129391324 (RBX1)
Enzymes [BR:pcad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     129391324 (RBX1)
Ubiquitin system [BR:pcad04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   129391324 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     129391324 (RBX1)
   Cul2 complex
     129391324 (RBX1)
   Cul3 complex
     129391324 (RBX1)
   Cul4 complex
     129391324 (RBX1)
   Cul7 complex
     129391324 (RBX1)
   Cul8 complex
     129391324 (RBX1)
   Cul9 complex
     129391324 (RBX1)
DNA repair and recombination proteins [BR:pcad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129391324 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129391324 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 129391324
NCBI-ProteinID: XP_023983052
UniProt: A0A2Y9SY00
LinkDB
Position
6:45619732..45630068
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcacgaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcggtagctctctgggcctgggatattgtggttgat
aactgtgccatctgccggaaccacattatggatctttgcatagagtgtcaagccaaccag
gcgtctgctacttctgaagagtgcaccgttgcgtggggagtctgtaaccatgcttttcac
ttccactgcatctcccgctggctcaaaacacggcaggtgtgtccgttggacaacagagag
tgggaatttcaaaaatatgggcactag

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