Pituophis catenifer annectens (San Diego gophersnake): 139308665
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Entry
139308665 CDS
T11059
Symbol
TRAF5
Name
(RefSeq) TNF receptor-associated factor 5
KO
K09849
TNF receptor-associated factor 5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04217
Necroptosis
pcae04621
NOD-like receptor signaling pathway
pcae05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
139308665 (TRAF5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139308665 (TRAF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139308665 (TRAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139308665 (TRAF5)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
139308665 (TRAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-TRAF_2
zf-C3HC4_2
zf-C3HC4
zf-RING_6
zf-RING_UBOX
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
139308665
NCBI-ProteinID:
XP_070788482
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MASEDLPGQLPNLYVRQNSSNAVSLEFDPDVNYQFVEILDERYKCTRCHLVLHNPHQTGC
GHRFCQHCIVSLRDLNTVPTCPIDNEIIKLQEVFKDNCCKREVLNLQVFCKNSPACTAKL
CLGRYQDHLQQCLFETVQCTNEGCHEKIVLKDLKEHLIQQCNFRKEQCQYCKQPVISINL
KIHEEVDCPDYPWICPYGCMQMILMKEAEDHVLVCPEMEIDCPYKMCGCPKKIKRSKLLE
HEDNFLREHMLHIVDKNSKLEDQISDLYKSLKYKEREILQLTDMIKNCEREFRQLSQLFC
KHRNLLASTQTLAIHIDKNTFLETQVRQLVQKTNQQQSKLDLRTLLDTIDNLKQKVALLE
SYDQRLVVLEDLATQQDAVFRMHGTQLNKNEERFKILEGASYNGKLIWKIMDYKIKKKEA
IEGHTLSLFSQPFYTSHCGYRMSARAYLNGDGSGRGTHVSLYFVVMRGEFDSLLSWPFKQ
KVTLMLLDQSGKKKHICETFKADPNSSSFKRPEGEMNVASGCPRFVAHSKLENAKNTYIK
DDTLFLKVMVDLTDLEEL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaagatcttccaggccagttaccaaatctgtacgtccgacagaactcctca
aatgcagtttctctagaatttgaccctgatgtcaactatcagtttgtggaaatcttagat
gaacgatacaaatgtacacgctgtcacctagtcctccataatccacaccagacaggatgt
ggacatagattttgccagcattgcattgtttctttgagagatttaaacacagtacctaca
tgtcctatagacaatgaaataataaaacttcaagaggttttcaaagataattgctgcaaa
agagaagtactcaatttgcaagtattttgtaaaaattcaccagcctgcactgcaaagtta
tgtctagggcgataccaggatcacctgcaacagtgtttgtttgaaactgtgcagtgtact
aatgaaggctgtcatgaaaaaattgttctgaaggatttaaaagaacaccttattcagcaa
tgtaactttagaaaagaacagtgccagtactgtaaacagcctgtgatatcaattaattta
aagatccatgaagaagtagattgtccagattatccctggatttgtccctatggctgcatg
cagatgattcttatgaaagaggcagaagatcatgttttggtatgccctgaaatggaaatt
gattgtccatataaaatgtgtggctgtcctaaaaagattaaaagaagcaagcttttagaa
cacgaggataacttcttgagagaacatatgctacacattgtagataagaactcaaagctg
gaagatcagatttctgacctttataagagccttaaatataaagagagagaaatcttgcaa
ctgacagatatgattaaaaattgtgagagagaattcagacaattatctcagctattttgc
aaacacagaaacctgctggcaagcactcagactttggccattcacattgataaaaatacc
ttcctggaaacacaagtaagacagctggtacaaaagacaaatcagcagcaaagcaaactg
gacctgagaacactactggacaccattgataacctaaagcagaaagttgctcttcttgaa
tcatatgatcaacgtctagttgttttagaagacttggctacccaacaagatgctgtcttc
agaatgcatgggacacaacttaacaaaaatgaagaacggttcaaaattttggaaggagca
agttacaatggaaaattgatctggaaaattatggactataaaattaagaagaaagaagct
atagaagggcacaccctctctttatttagtcaacctttttataccagtcactgtggatat
agaatgtctgccagagcatatttaaatggagatggctcaggacggggaactcatgtttcg
ttgtattttgtagtgatgagaggagaatttgattcattattatcatggcctttcaagcaa
aaggttacacttatgcttttggaccaaagtggaaagaaaaaacatatatgtgaaactttc
aaagctgatcctaacagcagcagcttcaaaaggccagaaggagaaatgaatgtggcttct
gggtgtccacggtttgttgcccactctaagttggaaaatgcaaaaaatacctacatcaaa
gatgatacactctttctgaaagtaatggtagatttgactgatcttgaggaattatga
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