Pituophis catenifer annectens (San Diego gophersnake): 139308748
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Entry
139308748 CDS
T11059
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae00900
Terpenoid backbone biosynthesis
pcae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
139308748 (GGPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcae01006
]
139308748 (GGPS1)
Enzymes [BR:
pcae01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
139308748 (GGPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
139308748 (GGPS1)
2.5.1.29 geranylgeranyl diphosphate synthase
139308748 (GGPS1)
Prenyltransferases [BR:
pcae01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
139308748 (GGPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
139308748
NCBI-ProteinID:
XP_070788651
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MRGCCQYYKALLGKHIFKMEELEDSSKRILLEPYNYLLQLPGKQVRTKLSQAFNHWLNVP
EDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPYVINCANFVYFLGLQK
VLTLDHPDAVKVFTSQLLELHKGQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGL
MQLFSNYKNDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW
SRPESTQVQNILRQRTENVDIKKYCVHYLENVGSFEYTRKTLEELESEAYKQIGLLGGNP
ELTALIKYLSKMFRDNEN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagaggctgttgtcaatactataaggcactgcttgggaaacacatttttaaaatggaa
gaactagaagattcatccaagagaattcttttagagccatacaactatctgcttcagctc
cctggtaaacaggtcagaactaaactttcccaagcgtttaatcattggttgaatgttcca
gaagacaaactacagatcataattgaagttacagaaatgttgcacaatgcaagtttgctt
atagatgacatagaagacaattcaaagctacgacgtggttttccagtggcccacagcatt
tatggaataccgtatgtgataaactgtgcaaactttgtatatttccttggtctacaaaag
gttttaacgcttgatcatccagatgctgtaaaagtattcaccagtcaactacttgaactc
cataagggccaaggcctggatatttactggagagatacatatacctgtcctacagaagaa
gaatataaagccatggttctgcaaaagacaggtggcctttttggactagctgtgggcctt
atgcagttattttcaaattataaaaatgatctgaaaccactccttaacactcttgggctc
ttctttcaaattagagatgattatgcaaatttacactccaaagaatatagtgaaaacaaa
agcttttgtgaagacctaactgaaggaaagttctcattcccaactattcatgcaatatgg
tccaggccagagagcacacaggttcaaaatattctgcgacagagaactgaaaatgtggat
ataaaaaaatactgtgtacattaccttgagaatgtgggatcctttgaatatacccggaaa
acactagaagaacttgagtctgaagcttataaacaaattggattgcttgggggcaaccct
gaacttacagcattaattaaatatttaagcaaaatgttcagggacaatgaaaactaa
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