Pituophis catenifer annectens (San Diego gophersnake): 139309573
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Entry
139309573 CDS
T11059
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139309573 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcae01007
]
139309573 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcae03016
]
139309573 (IARS1)
Enzymes [BR:
pcae01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
139309573 (IARS1)
Amino acid related enzymes [BR:
pcae01007
]
Aminoacyl-tRNA synthetase
Class I (U)
139309573 (IARS1)
Transfer RNA biogenesis [BR:
pcae03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139309573 (IARS1)
Prokaryotic type
Other AARSs
139309573 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Fer4_11
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
139309573
NCBI-ProteinID:
XP_070789785
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MIQQVPENINFPEEEEKILQLWNTLNCFQECLKQSKNRPSFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKALGIKGPEDVAKMGIAEYNRNC
RGIVMRYSQEWRTSVTRLGRWIDFDNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIITFPLEDDESISLVAWTTTPWTLPSNLALCVNP
DLQYVKVKDQNTGKKFILMEARLASLYKSESEYEVLDRFPGVTLKGKKYKPLFNYFIKCR
ENGAFSVVTDNYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTA
EVTDFSGQYVKDADKNIIKALKEQGRLVQISTFKHNYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNSLCYWVPDFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSVAELEELSGVKITDLHRESVDHITIPSCCGKGVLHRVSEVFDCWFESGSMPYAQVHY
PFENKKEFEDAFPADFIAEGIDQTRGWFYTLLVLSSALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPTKIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLIQNVVILQLKKDGKEFLYNENAIKESNNIMDKWILSFTQSLIQFFRAEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTEDCIMALETLFSVLYSMCRLMAPYTPFITEL
MYQNLKTLIHPACVQEKNTDSIHYLMLPQVREDLIDKNIESAVSRMQSVIELGRVIRDRK
TIPVKYPLKEVVIIHQDSQALEDIKSLEKYILEELNVRKVTLSTDKDKYGIRLRAEPDHM
VLGKRLKGAFKSVMAAIKELPSELLEEFQKTGTTVVEGHELHEEDLRLMYTFDQTVGGYG
QFEAHSDSQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYQASPEG
DYLDTVIKEHTDFIFATIKAALKPYPVSPLEEVLIQEKTQLKGSELEITIAKGAVHHCTE
PACAYVTLNICINGKEQDGMVLLENPKGDNKLDFTKLVTTIACIFGLEKAKVAIYSGKQE
VKKQTDLLSLNGKKLHVTAGPLPIINNLDAFLCQYINLQLVNAKPQECLNGMVGTLLMEN
PVGQNGLTYQGLLHETGKMFGLRSRKLKLFLDEALTKEVTKETSMKFLNTKTLYVHVIPT
TAEC
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgattcagcaagtcccagagaacataaactttccagaggaagaagagaaaatactgcag
ctttggaacacacttaattgctttcaagaatgtctcaagcagtcaaaaaatagacctagt
tttacattctatgatggtcctccatttgccacagggcttccgcattatggccacatactt
gcaggaaccattaaagacatagtaactagatttgctcatcagagtgggtttcatgttgac
agaagatttggctgggattgccatggtttgcctgtggagtatgaaattgacaaagcacta
ggcatcaaaggaccagaagatgttgcaaaaatggggattgcagaatataatcgcaactgt
cgaggaattgtgatgagatattcccaagaatggagaaccagtgttacaagacttgggcgg
tggattgattttgacaatgattataaaactctttatccagaatttatggagtctgtctgg
tgggttttcaaacagctatatgacaaaggattggtataccgaggagttaaagttatgccc
ttctcaactgcatgtaatacacccctttccaactttgagtctcaccagaattataaggat
gttcaagatccctcagttattatcacctttccattggaagatgatgaaagtatatctctt
gttgcttggacaacaactccatggactctgcctagcaatttagccttgtgtgttaatcca
gatttgcagtatgtgaaagtgaaagaccaaaatactgggaaaaaattcatattgatggaa
gctagactggcatctctctacaaatctgaaagtgaatatgaagtacttgacaggtttcct
ggtgttacactaaaagggaagaaatacaagcctcttttcaattactttataaagtgcaga
gaaaatggtgctttttctgtagtgactgacaactatgtgaaggaagaagaaggtacagga
gttgtacatcaagctccttactttggtgctgatgattacagggtctgcatggattttaat
attattcagaaggattcagtacctgtttgtcctgttgatgcttcaggatgtttcacagca
gaagtgacagacttctctggacagtacgtcaaggacgccgataaaaatataatcaaagca
ctaaaggaacaaggaagattggtccaaatcagcacttttaagcacaactatcctttctgc
tggaggtcagatacacctctgatatacaaagcagttccaagctggtttgttcgtgtggaa
cacatggtggaaaagttgctggaaaacaattctctatgttattgggttcctgacttcgtg
agagagaagcggtttggcaactggttgagagatgcacgggattgggctatttcacgaaac
cgttattggggaactccgattccattgtgggtcagtgatgattttgaagaggtggtttgt
attgggtccgtagcagaactggaagaactgtcaggagtgaaaatcactgatctccacaga
gaaagtgttgatcatataactatcccttcatgctgtggcaaaggtgtcttacatcgtgtt
tcagaagtgtttgactgctggtttgaaagtggaagtatgccttatgcccaagtccattat
ccgtttgagaataagaaagaatttgaagatgcttttcctgctgatttcatagctgaaggc
attgaccaaaccagaggatggttttacactttgctggtgttatcgtcagctctcttcgga
aagcctcctttcaaaaatgtaattgtaaatggcctcgttcttgccagtgatgggcaaaag
atgagcaaacgaaagaagaattacccagatccaacaaaaattgtcaactcttatggagct
gatgcactgaggttgtaccttatcaattctccagttgtaagagcggaaaacctaagattc
aaggaagaaggtgtaagagatgtgctgaaagatgtcttccttccctggtataatgcctat
cgctttctgattcagaatgttgtcattctgcaactcaagaaagatgggaaggaattcctt
tacaacgagaatgcaattaaagaaagcaacaatattatggataaatggatcctttccttc
acacaatcactgattcagttcttcagggctgagatggctgcctacagactgtacacagta
gttcctcgactggttaaatttgtagacattctaaccaactggtatgtcagaatgaatcga
aggaggttaaagggtgagaatggaacagaagactgcattatggccttagaaaccttattc
agcgtcctctactccatgtgcagacttatggcaccttatactccgtttattaccgaacta
atgtaccagaatttgaagactcttattcatcctgcttgtgttcaggagaagaatactgat
agcattcactacctcatgcttcctcaagttagggaagacctgatcgacaaaaacatagaa
agtgctgtttctcggatgcagtctgttattgagctgggacgtgtaatcagagataggaaa
accattccagtaaagtatccattgaaagaagtggtgattatccatcaggattctcaagca
ctggaagacatcaagtccttggaaaagtatatacttgaggaacttaatgtccgcaaagtg
actttatcaactgataaagataagtacggaatccgtttgagagcagaacctgatcatatg
gtgcttgggaagcgacttaaaggtgcctttaaatctgtaatggctgctatcaaagaattg
ccaagtgagctgttggaagaatttcagaagacaggcacaactgttgtagaagggcatgaa
ttgcatgaggaagatctccgtctgatgtatacctttgaccagactgtaggaggatatggc
cagtttgaagcacattctgattctcaggttttagttctcctagatgttactcctgatcag
tctatggttgatgaaggtgttgcacgggaagtaataaatcgcattcaaaaacttcgaaag
aagcgcaatctggttcctacagatgagattacagtatattatcaggcatctccagaaggt
gattatcttgatactgttattaaggaacatacagattttatttttgccacaataaaagct
gctttgaagccatatccagtgtctcccttggaggaagtgcttattcaagaaaaaactcag
ctgaagggatcagaactggaaattacaatagccaaaggagctgtacatcactgtactgag
ccagcgtgtgcttatgtcactctgaacatctgcattaatggtaaagaacaagatggaatg
gtgttgctggaaaatccgaagggagacaataaattagacttcaccaaacttgttactact
attgcgtgcatttttggtcttgaaaaagcaaaagtagcaatttatagtggaaaacaagaa
gtaaaaaaacaaacagatttgctgagtcttaatggaaagaagcttcatgtaactgcagga
ccattgccaattataaacaatcttgatgcctttttatgtcagtatatcaatttacaacta
gtgaatgcaaaaccacaagagtgtctaaatggaatggtgggaacccttcttatggaaaac
cctgttggtcaaaatggattaacatatcaagggcttctgcatgaaacaggcaaaatgttt
ggactcagaagcaggaagctaaaattgttcttggatgaagcattgacaaaagaggttaca
aaggagacttccatgaagttcttaaatacaaagacactgtatgttcatgttataccaaca
acagctgaatgctaa
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integrated database retrieval system
