Pituophis catenifer annectens (San Diego gophersnake): 139309693
Help
Entry
139309693 CDS
T11059
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04010
MAPK signaling pathway
pcae04020
Calcium signaling pathway
pcae04510
Focal adhesion
pcae04540
Gap junction
pcae04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139309693 (PDGFRB)
04020 Calcium signaling pathway
139309693 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139309693 (PDGFRB)
04540 Gap junction
139309693 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
139309693 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcae01001
]
139309693 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pcae04090
]
139309693 (PDGFRB)
Enzymes [BR:
pcae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
139309693 (PDGFRB)
Protein kinases [BR:
pcae01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
139309693 (PDGFRB)
CD molecules [BR:
pcae04090
]
Proteins
139309693 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
C2-set_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Adeno_E3_CR1
V-set
Motif
Other DBs
NCBI-GeneID:
139309693
NCBI-ProteinID:
XP_070789976
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MPAFFRKMLVFLVLFLTSAKEISSLEITPSAHEVVLNLYTDFTLKCSGHDEVNWETDNKH
TKLDTVLEKRGTIFTNTLTLRNLTGLNTGEYFCTSNQPLDGKAIYIFVPDLSMPFLPSTQ
EDTFVFSTGFVEVIIPCRVTNPNATVSLHEKRVNDPVPGMYFPQQGFKGQFEDKAYICKA
TIEDEEFESETFYVYNIEVSSTPTSFINVSISAVQTILKQGENIIVTCTVRGIELISYIW
SYPGQMVGKEVEPVTHIVPGVKHHTNSILTIPNADFDDQGLYVCETTDTYFGQKEEKSIF
IRVIERGFVTFHTVLNETVFAELHKSHTFLIQIEAYPTPTIIWFQNNKPLTSESNSDFAI
NSRNLSETRYQTTLTLVRVKASEGGLYTVRAFHEDDSKELFFHLQINVPATVTELRDSSN
KTNGEQTVICTTEGMPQPEITWYTCNNDKWCAGATTKILGNTSEEMNLQTNFTYEDDRKI
YVVTSKLHFHRVDEPIFIQCAAQNLLGAHTQQITLVPYNLPFKVIVISVIVAFVILMVLF
LVILIFLWRKKPRYEIHWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDRLVLGRTLGS
GAFGRVVEAIAHSLSHSQSTMRVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLL
GACTKGGPIYIITEYCRNGDLVDYLHRNKHTFLQCYSEKAKQEAELYGNGMRVDRLQSHT
SISVESDGGYMDMSKDESLDYVPMSDMKGEIKYVDIDSSNYGATYELDSYSPSASEKATL
ISESPLLTYIDLVGVSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDI
MRDSNYISKGNTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMND
QFYNAIKRGYRMSKPTHASNEIYEIMQKCWEEKFEIRPSFSQLVLLMGNLLTDSYKKKYQ
QVNEEFLKSDHPAIMRTRPRNTGFSPSRSTASDSVSSSSVLYTAVEQNGVDNDYIIPLPD
PKPEGDNNNPPEASSSRASSTLNEANTSSTISCDSPLAPEQEEEQASESKSDC
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctttctttcggaagatgctagtcttcttggtcctcttcctcacaagtgcgaaa
gaaatcagctccctggaaattactcccagtgcccacgaagttgtcctcaatctctacact
gattttaccttgaaatgttcaggccacgatgaggttaactgggaaacagacaacaagcat
accaaattagacactgtgctggagaaaaggggcaccatttttaccaacaccctcacttta
aggaacttgactggtttgaacacaggtgaatatttctgtaccagcaatcaacccctggat
ggaaaggccatctacatttttgtgccagatctctccatgcctttcctaccaagcacccag
gaagacacctttgtgttcagcacaggctttgttgaagtcattattccttgccgtgtgaca
aaccccaatgccacggtctctcttcatgaaaagagggttaatgatccagtccctggaatg
tattttccacagcaaggctttaaaggacagtttgaagacaaagcctatatctgcaaggca
acgatagaagatgaagagtttgagtctgaaacattctatgtctacaatatcgaagtttct
tccactcctacatccttcatcaatgtttctatcagtgcggtgcaaactattttgaaacaa
ggtgaaaatatcattgtgacatgtaccgtaagaggcattgagttgatcagttatatctgg
agttatcctggacagatggtaggcaaggaagtagaacccgtgacacatatcgttccagga
gtcaaacatcatactaattccatcctaaccattccaaatgcagactttgatgatcaaggt
ctatatgtatgtgagaccacagatacatattttggacaaaaagaagaaaaaagtatcttt
atcagagtgattgagcgtggctttgtgacttttcacactgttctgaatgagaccgtattt
gcagaactccacaaaagtcacacctttttgatacagatcgaagcctatccaactccaacc
atcatctggtttcagaataacaagcccctgacttctgagagcaacagtgattttgctatc
aacagcaggaatttgtcagaaaccaggtatcaaactactctgaccctcgtaagggtaaaa
gcaagtgagggaggtttgtacactgtccgagcatttcacgaagatgactcaaaagagctc
ttctttcatttgcagattaatgtcccagctacagtgactgagctgagagacagtagcaac
aaaacaaatggtgagcaaacagtgatttgtactacagaaggaatgccacaaccagagatt
acctggtatacctgtaataatgacaaatggtgtgcgggagcaactactaagatcctggga
aacacctcagaagaaatgaatctgcaaacaaatttcacttatgaagatgaccgaaaaata
tatgttgtgacaagcaagctccactttcacagagtagatgagcctatctttatccaatgt
gcagctcaaaatctccttggtgcacacactcagcaaatcacactggttccatacaatcta
ccttttaaagtgatcgttatttcagtaatcgtggcttttgtgattcttatggttcttttc
ctggtgatcctcattttcttgtggcgaaaaaagcctcgatatgaaattcactggaaggtg
attgagtccgtcagctctgatgggcatgaatatatctacgtggaccctatgcaactgcct
tatgattccagctgggaggtcccaagggacaggctggttttaggacgtacattgggctct
ggagcctttggccgtgtggtggaagcaattgctcacagcctcagccattcccagtccacc
atgagagttgctgtgaaaatgctcaagtccacagcccgaagcagtgaaaagcaggctctg
atgtcagaactgaagatcatgagccaccttgggcctcacttgaacattgtgaacttgctt
ggtgcttgcaccaaaggaggtcctatctacatcataactgaatattgtcgcaatggagac
ctggtggactatctacacaggaacaagcacaccttcctgcagtgctacagtgagaaggcc
aagcaagaagcagaattgtatgggaatggcatgcgtgtagaccggctgcaaagccataca
tccatatccgtagaaagtgatggaggctacatggatatgagtaaggatgaatcactggat
tatgtgcccatgtctgacatgaagggtgaaatcaagtatgtagacattgattcttccaat
tatggtgcgacctatgagctggacagctattcgccttcagcttcagaaaaagcgaccttg
atcagcgagtctcctcttctcacctatattgatcttgttggagtcagcttccaagtggct
aagggaatggagttcttagcttctaaaaactgtgtgcaccgtgatctggctgcaagaaac
gtactgatctgcgaagggaaactggtgaagatctgtgactttggcctagccagggacatc
atgcgggattcaaattatatttccaaaggaaataccttcttgcctttgaaatggatggcc
cctgagagcatcttcaacaacctctacactaccttaagcgatgtgtggtctttcgggatt
cttctatgggaaatattcactctaggtgggactccgtatcctgaactgcctatgaatgac
caattctataatgctattaaacgtggctaccggatgtccaaacctacccatgcatccaat
gaaatctatgaaattatgcagaaatgctgggaagagaagtttgagattcgaccttctttc
tctcaactggtacttcttatggggaacctactaacagacagctataagaagaagtatcaa
caggtcaacgaagagttcttgaaaagtgatcaccctgctattatgcgtacaaggcccagg
aacacaggattcagtccttctaggtccactgcaagtgacagtgtcagttcaagttctgtc
ctctatacagctgtggagcagaatggagtggacaatgattatatcattcctttacctgat
ccgaaaccagagggagacaataataaccctccggaggcctctagcagcagagcaagttca
actctgaatgaagcaaacacttcatctactatatcttgtgacagtcctttagcccccgag
caagaagaagaacaagcatctgagtcaaaatcagattgctag
DBGET
integrated database retrieval system
