Pituophis catenifer annectens (San Diego gophersnake): 139311711
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Entry
139311711 CDS
T11059
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
KO
K06752
MHC class II antigen
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04145
Phagosome
pcae04514
Cell adhesion molecules
pcae04672
Intestinal immune network for IgA production
pcae05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139311711
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139311711
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
139311711
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139311711
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcae04147
]
139311711
Exosome [BR:
pcae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139311711
Exosomal proteins of epithelial cells
139311711
Exosomal proteins of breast milk
139311711
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_3
C2-set_2
MHC_I
Psg1
Marek_A
Motif
Other DBs
NCBI-GeneID:
139311711
NCBI-ProteinID:
XP_070792297
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MTLQKGEFPLVLLLFLDTPKSKVRGKLLLPPSRPTDSASGAGSLRLFLLSLWGRLWGASM
ALAGLPLMLLLGPLAQIPGSEGGKETPAHFLHQRKAECRFLNGTQRVRFLQSYFYDRQEM
VRFDSDLGEFVAVTELGEAAADAWNRDKFYLQSAKAAVDSVCRNNYEVYSYQAAKVEERL
IGRRAKPTVSISPTKMEPSSPNTILLCTATGFYPMEIEVQWLKNGRPEEEGVAFGEELQN
GDWTYQLQVMLETQPQWGDVYTCKVGHASLEAPITIQWEPRSSSSARSKLWTGIMGAVIG
VAFLAVGLFSYLKSKKATPIQPPAALMN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcagaagggagaattcccattggtcctcctgctcttcctggacactcccaag
tccaaagtccgaggaaaactcctcctgcccccatccagacccaccgattccgcgtctggg
gctgggagcctccgcctctttctcctctctctttgggggcgcttgtggggagcctccatg
gctttggctgggctccccctgatgctgctgctggggccgctggcccagatccccggaagc
gaaggggggaaggagacccccgcccatttcctgcaccagaggaaggccgagtgccgcttc
ctcaacgggacgcagcgggtgaggttcctgcagagctacttctacgaccggcaggagatg
gtccgcttcgacagcgacctcggggagttcgtggccgtcacggagttgggggaggcggct
gcggacgcttggaacagggataagttctacctgcagagcgcgaaggcggccgtggattcc
gtctgccggaacaactacgaggtgtacagctaccaggcggccaaggtggaggagcgcctg
attggccggagagccaagcccaccgtctccatctcccccaccaagatggagccctcttcc
cccaacaccatcctcctctgcaccgcgacgggcttttaccccatggagatcgaggtccag
tggctgaagaacgggcggccggaggaggagggcgtggcctttggggaggagctccagaac
ggagactggacctaccagctccaggtgatgttggagacccagccccaatggggggatgtc
tacacttgcaaggtggggcatgccagcctggaggcccccatcaccatccaatgggagccc
cgttcctccagctctgccaggagcaaactctggacggggatcatgggggccgtgatagga
gtggccttcctggctgtggggctcttctcctacctgaagagcaagaaagcaactcccatc
caacctcctgcagcactcatgaactaa
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