Pituophis catenifer annectens (San Diego gophersnake): 139315273
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Entry
139315273 CDS
T11059
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04514
Cell adhesion molecules
pcae04520
Adherens junction
pcae04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139315273 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139315273 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
139315273 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcae01009
]
139315273 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139315273 (PTPRF)
Enzymes [BR:
pcae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
139315273 (PTPRF)
Protein phosphatases and associated proteins [BR:
pcae01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
139315273 (PTPRF)
Cell adhesion molecules [BR:
pcae04515
]
Immunoglobulin superfamily
Type II RPTP family
139315273 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Tc-R-P
PTP-SAK
V-set
DSPc
Interfer-bind
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Ig_5
Insulin_TMD
Fn3_PTPRU
TMEM154
Egh16-like
ICAM_N
DUF3377
Motif
Other DBs
NCBI-GeneID:
139315273
NCBI-ProteinID:
XP_070797524
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MKPNFSISTFVVVAAILCSLMSSTEADSKPNFMKTPEDQIGISGGVASFVCQATGEPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVLRDEAIYECMATSSVGEINTSAKLT
VLEENQLPPGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWYKDFLPVDTAASNGR
IKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVSPRFSIPPSNHEV
MPGGSVNLTCVAVGSPMPYVKWIVGDVELTKEDDMPMGRNVLELINITQSANYTCEAMSS
LGVIHATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNADPISYYVIQYKSKSLEGTF
QEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRSLPSELVEARTGEQAPSSPPLKVQAR
MLSASTMLVQWEQPEEPNGLIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITETT
YSIRVLAFTSVGDGPPSDVIQVKTQQGVPAQPADFQAEAESDTRIMLTWLPASQERITKY
ELIYWEGTNGIQHKVEFDQTSSYAVEGLKPDTLYKFQLGARSEQGLGVLTPILEARTAQS
TPSAPPQEVACVSISSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGEDSTKHVVEGIGH
EHSSWEISNLEKWTEYKVWVRAHTDVGPGPESIPVSVRTDEDVPSAPPRKVEVESVNSTA
IRVSWKSPISNKQHGQIRGYQVTYVKMENNEPVGPHVIKDVMVAESQLRLKDSADHETII
GGLLPETTYSVSIAAYTTKGDGARSKARVIATTGAVPGKPTMMISTTSMNTALINWLPPK
EMVGELLGYMLRYKCADEEKMIVIQFGKDDDHYTVTKLYKGATYIFKLSAKNRAGPGEEF
EKEISTPEEPPNGFPQNLEVVGLTTSTTKVTWNPPLLAERNGKITNYTVVYRDINSQQNL
TNVTKEQSITLTNLKSDTTYDIKVRAHTSKGAGPLSPSIQSRTMPMEQVFAKNFRVSAVM
KTSVLLSWEVPDSYKSAVPFKILYNGQTVEVDGHSMKKLINDLQPDTNYSFALTNRGSSA
GALQHRVFIRTSPDVFQTKPVSTYKYIHNGQFTFTLPKVKTSVPVRSYYIVVVPIEHTSS
ILASRLKSPDEMELDQLLEAINQGATERRQRRQAERLKPYIAAQVEELPETFVLGDEKNY
KGFFNKPLSEDLSYRCFVLASLEDGDTKKYAASPYSDEIVMEVSPKQQDEPEMLWVMGPV
LAVILIIIIVIAILLFKRKRANSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGMRD
HPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYD
HSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATIVM
MTRLEEKSRVKCDQYWPGRGTETYGLIQVTLLDTVELATYTVRTFALYKNGSSEKRELRQ
FQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPVVVHCSAGVGRTGCFIVIDAMLERM
KHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAHIQKLS
QVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRG
VEGSDYINASFVDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV
PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMF
QTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctaacttcagcatctcaacatttgttgtggtagcagcaattttgtgctccttg
atgtcgtcaacagaggcagatagcaaaccaaactttatgaaaacccctgaagatcagatt
gggatttctggtggcgtggcctcctttgtatgccaagcaacaggagagccaaagccacgc
atcacttggatgaagaaaggaaaaaaggtcagctcccagcgatttgaggttattgaattt
gatgatggttctggatcagttctgcggattcaaccactccgtgtccttcgggatgaagca
atttatgagtgcatggctaccagcagtgttggcgagataaacactagtgccaaacttaca
gtattagaagagaatcaacttcctcctggctttccaactatagatatgggcccccagctc
aaggtagtagagaaggcccgcacagctaccatgctctgtgctgccagtggcaatcctgac
cccgaaatctcctggtacaaagatttccttccggtggacacagctgctagcaatggcaga
atcaaacagcttcgttcaggggctctccaaattgaaaacagcgaggagtcggatcaaggc
aaatatgaatgtgtcgctacaaacagtgcagggacccgttactctgctccagcaaacctt
tatgtgcgagtgcggcgagtatctcctcgattttcaatccctccaagcaaccatgaggtg
atgcctggagggagtgtgaacctcacatgtgtagcagtggggtctccaatgccgtatgtg
aagtggattgtcggagatgtggaattaacaaaagaagatgacatgccaatgggcaggaat
gttctagaactgatcaatattacacaatcagccaactatacatgtgaagccatgtcctca
ctgggagtaatccatgcaacagcacagataactgtcaaagctctgccaaagcccccaaca
gagccattagtgactgaaacaacagccaccagtgttactctcacttgggactctggaaat
gcagaccccatctcctattatgtcatccaatataagtcgaaatctttggaaggaacattc
caagaagtagatggtgtggccaccacccgctatagtattggtggcctaagccccttctca
gaatatgagttccgcattattgctgtaaacaacattggaaggagccttcctagtgaactg
gttgaggcgcggacaggagaacaagctccatcaagcccacctctcaaagtgcaggcacgg
atgctgagtgctagcactatgctggtccagtgggaacaacctgaagagcctaatggactg
attcgaggctaccgggtatactacaccactgatccccatctaccactcagcatgtggcag
aagcacaacactgatgacagtcatcttaccactgtgggcagtttgataactgagactaca
tacagtatccgtgtcttggctttcacctcagtaggagatggccccccttctgatgttatt
caagtcaagacccagcagggcgttccagcccaaccagcagacttccaagccgaggccgag
tcagacacacggatcatgttgacttggctgccagcctctcaagagcgcatcaccaagtat
gagctgatatactgggagggaacaaatgggatccagcataaggtggaattcgaccagact
tcatcttatgcagttgaagggctcaagccagacacactctacaaatttcaactaggagcc
cggtctgagcagggactaggagtccttactccaattttggaagctcggacagcacagtcc
accccttctgccccaccccaagaggtcgcatgtgtaagcatcagctctaccaccatccgg
gtaagttgggtaccaccaccggctcagagccgcaatggagtcatcacacaatattccatc
gcgtaccaggcagtggaaggagaggacagcaccaagcatgtggttgagggcattggacat
gagcattccagctgggagatcagcaacttggagaaatggacagagtacaaagtgtgggtg
agggctcacacagatgttggtcctggaccagagagcatccctgtctctgttcgcactgat
gaagacgtgcccagtgctcccccacggaaagtggaggtagagtcagtgaactcaacagca
attcgtgtttcctggaagtcacccatctccaacaaacagcatggccaaattcgaggttac
caagtcacctatgtaaaaatggagaacaatgaaccagttggaccacatgtcatcaaagat
gtcatggtagctgaatcccagttgaggcttaaggactctgctgaccacgaaaccatcata
gggggccttttaccagaaactacctattctgtcagcatcgcagcctataccactaaaggg
gatggagcccgcagcaaggccagagtgattgctacaactggagcagtcccaggcaaacct
actatgatgatcagtacaacatctatgaacactgccctaatcaattggctgccacccaaa
gagatggttggagagctcttgggctacatgctgcgatacaaatgtgctgatgaagagaag
atgatagtaattcagtttggaaaagatgacgatcactacactgtgaccaaactttacaag
ggtgccacttacatcttcaaattgtctgcaaagaatagggcaggccctggggaggagttt
gagaaggaaataagtactccagaggagccaccaaatggcttccctcagaacctggaggtg
gttgggcttaccacctccaccactaaagtgacatggaatccaccactgctggctgagagg
aatggaaaaattaccaactatacagttgtatacagagacataaacagccagcaaaacctg
accaatgttactaaggaacaaagtatcactctgaccaatctcaaatcggatacaacttat
gacatcaaagttagagcccacactagcaagggggcgggacctctcagccccagcattcaa
tcaagaacgatgccaatggaacaagtgttcgcaaagaacttccgtgtcagcgcagtgatg
aaaacctcagtgctacttagttgggaagtgcctgattcttataaatcggcagtaccattc
aagattctatacaatgggcagactgtggaggtagatggacattctatgaagaagctgatt
aatgacttgcagccggacacaaattattcctttgctcttacaaaccggggaagtagtgca
ggcgcattgcaacatcgggtcttcatcaggacatcacctgatgttttccaaacaaagcct
gtttccacatacaaatatatccataatggacagttcaccttcaccctccccaaagtgaag
acttctgtgccagtcaggtcgtactacattgtggtagtaccaatagagcacacaagcagt
atacttgcctccagactgaagagtccagatgagatggaactggaccagctacttgaggcc
ataaaccaaggggccacagaaagacgccaacgtcgacaagcagaacgcctgaagccttat
atcgcagcccaagtggaagaactgccagaaacatttgttttgggagatgaaaaaaattat
aaaggcttctttaataagccactttcagaagatttgagctaccgttgttttgtgctggct
tcactggaggatggtgatacgaagaagtatgcagccagtccctactcagatgagattgtg
atggaggtatcaccaaagcagcaagatgaaccagaaatgctgtgggtgatggggcctgtc
cttgcggtcatcttgattatcattattgttattgctatcctactcttcaaaaggaaaagg
gccaattcaccctcatccaaggatgaacattccattggcctgaaggactccttgctggcc
cactcctctgaccctgttgaaatgaggcgacttaactaccaaacaccaggcatgcgtgac
catcctcccattccagtgacagaccttgctgacaatattgacagactgaaagccaacgat
ggactgaaattctcccaggaatatgagtccattgatcctgggcagcagttcacctgggag
aactccaacttggaagtgaacaaaccaaagaatcgctatgcaaatgtgattgcctatgat
cactctcgggtcatcttgacctccattgatggagtccctggaagtgactacatcaatgcc
aattatattgatggctaccgcaaacagaacgcttacattgctacacaggggccactgcct
gagacactcagtgacttctggcgaatggtatgggagcaacgtacagcaacaatcgtcatg
atgacacgactggaggaaaagtctcgggtgaaatgtgatcagtactggcctggacgtggt
acagagacctatgggttgatccaagtgactttgctggatactgttgaacttgcaacttat
acagtccgaacatttgccctgtacaagaatggatccagcgaaaaacgggaactgcgacag
tttcagtttatggcttggcctgaccatggtgtgccagaatatcctactcctattttagca
ttcttaagacgagtgaaagcatgcaatcctccagatgctggcccagtggttgtacattgc
agtgctggtgtaggcagaacaggctgcttcattgtaattgatgccatgcttgagaggatg
aagcatgaaaagacagtggacatctatgggcatgtgacatgcatgcgctcacaaagaaac
tatatggtgcagactgaggatcaatatatcttcatccacgaagccttgctcgaagcagcc
acttgtggaaacaccgaggtgcctgcccgcaatctctttgcccacatccagaaactaagt
caggtaccgccaggtgaaagtgtcacagcaatggaactggagtttaagctccttgccaat
tccaaagcacatacctcacgattcatcagtgccaatcttccatgcaacaaattcaaaaac
cgcctagtgaatatcatgccctatgaattgacacgggtttgcctacagccaatccggggt
gttgaaggctcagattatatcaatgctagctttgtagatggttacagacaacagaaggct
tacatcgccacacagggacctttggctgagactacagaggatttctggagaatgctgtgg
gaacacaactccaccattgtagtgatgctgacaaaactgcgagaaatgggacgggaaaaa
tgccaccagtactggccagcagaacgctctgctcggtaccagtacttcgtagtagatcct
atggctgaatataacatgcctcaatatatccttcgtgagtttaaagtcactgatgctaga
gatgggcaatcaagaactatccggcaattccagttcactgactggccagagcagggagta
ccaaaaacaggcgaaggctttattgacttcattggccaagtacataaaactaaggagcag
tttggacaggatgggcccatcacagtacactgcagtgcgggggtcggacgcacaggggtg
ttcatcacattgagtattgtactggagcgtatgcgctatgaaggtgtagttgacatgttc
cagacagtgaagaccctgagaacacagcgaccagccatggtgcagacagaggaccagtat
cagctgtgttatcgggctgctctggagtatcttggcagctttgatcactatgcaacgtaa
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integrated database retrieval system
