Pituophis catenifer annectens (San Diego gophersnake): 139316396
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Entry
139316396 CDS
T11059
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139316396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139316396
04121 Ubiquitin system [BR:
pcae04121
]
139316396
Membrane trafficking [BR:
pcae04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
139316396
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139316396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR41
DSE1_N
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
ASA1
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_RIG_2nd
F-box
TRM82_WD
CFAP251_N
Beta-prop_RIG_1st
Beta-prop_NOL10_N
Beta-prop_ACSF4
Beta-prop_Aladin
Beta-prop_VPS8
PAC11
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Ge1_WD40
PQQ_2
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
Beta-prop_NWD2_C
KNTC1_N
Beta-prop_pof12
PALB2_WD40
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
139316396
NCBI-ProteinID:
XP_070799201
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MWAGRVVCAGARRRAERGGSDVGVRVRGWQDRRQPGRRGGAGARVGRDRTPPSARDRAQE
GGERRLGGWRRRRLFRGGGAAGARLTVSRPAQELRGFGRLEDLLRVKGITARTLEVNRQR
VTCSHRPETPDGAQGSPRAGREAAGARSLASPSQDGGGGGGGGAGGPRGEVAAVRSPGGP
ERSPERGGRPGSPRGSGESEEESESSDEAGGDGYFYYTVDERWIDYVERTEGGGLLQHSR
PKMKRKSEAGGPESKTQSPGKKLCKSSEPGRVLGPCIARPAATFGDLRNAKAGQVRCRHI
PPVAPPPELQDWLRTFQRWSGPEKLLALDELIDRCEPPQIKHMMQVIEPQFQRDFISLLP
KELALYVLSFLEPRDLLRAAQTCRYWRILAEDNLLWREKCRDGGIEEPLSLRKRRLLSPG
FMYSPWKLAFLRQHRIDMNWRNGDARPPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKV
WSAITGECVQTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNADTGECVHTLYGHTSTVR
CMHLHDTRVVSGSRDATLRLWDIETGQCLHVLMGHVAAVRCVQYDGYKVVSGAYDYTVKV
WDPETESCTHTLQGHTNRVYSLQFDGTHIVSGSLDTSIRVWDAESGNCLHTLMGHQSLTS
GMELRENILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFSSKFVVTSSDDGT
VKLWDLKTGEFVRNLVALESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD
LK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggggcgggtggtttgcgcaggcgcgcggcggcgggccgagcgcggcggtagc
gatgtcggggtccgggtccgggggtggcaggatagacgtcaaccgggccggcgcggcgga
gctggagcgcgcgttggtcgggatcggacgccgccgagcgcgagggatcgtgcgcaagag
ggaggtgagcggcgactcggggggtggcggcggcggcggctgtttcggggcggaggtgcc
gcgggcgcccgcctgaccgtctcccggcccgcgcaggagctgaggggctttggccgcctg
gaggacctgctgcgcgtcaagggcatcaccgcccggaccctggaggtgaaccgtcagcgc
gtgacctgctcgcaccgcccggagactcccgacggcgcccaaggctctccgcgcgctggc
agggaggccgcgggggcgcgcagcctcgcttccccttcgcaggatggcggcggcggcggc
ggcggcggagcaggaggaccgcgcggagaagtcgccgctgtccgcagccccggagggccg
gaacgcagtcctgagcgcggcggccgacccggttccccgcgaggcagcggcgagtcggag
gaggagagcgagagcagcgacgaggcgggcggggacggttatttctactacacggtggac
gagcgctggatcgactatgtggagcggacggaaggcggggggctcctccagcactcccgg
cccaagatgaagcgtaagtcggaggccgggggtcccgagagcaaaacccagtccccaggg
aagaagctctgcaaaagttccgagccgggcagggtgctgggtccctgcatagcacggcct
gcggccacttttggggatcttcggaatgccaaggctggccaggtgcgatgccggcacatc
cctcccgtggctccgccccctgagctgcaggactggttacgcactttccagcgctggagt
ggcccggagaagctgctggccctggatgagctcattgaccgctgtgagccccctcagatt
aagcacatgatgcaagtgattgagccccagttccagcgtgacttcatctcacttctgccg
aaggagctggctctctatgtcctctccttcctggagcctcgggacctgctccgagctgcg
cagacgtgtcgctactggcgtattctggctgaagacaacctgctctggcgggagaagtgc
cgcgatggaggtattgaagagccactgagcctgcgtaagcgtcggctgctgagcccgggc
ttcatgtacagcccttggaagctggcctttctacggcagcatcgcattgatatgaactgg
cgcaatggagatgcccggccccccaaggtcctgaaaggtcacgatgaccacgtcatcacc
tgtctccagttctgtggcaaccgcattgtcagtggctcagatgacaacacgctcaaggtt
tggtctgccatcaccggtgagtgtgtgcagactctggtaggacacactggtggcgtttgg
tcctcccagatgagggacaatattatcatcagtggctctacagaccggaccttgaaagtg
tggaatgcagacacaggcgaatgcgtgcacacactctatggtcacacctctactgtgcgt
tgcatgcatcttcatgacactagggtggtgagtggctcccgggatgccactctccgtctt
tgggatatagagaccgggcagtgcctacatgtgctaatgggacatgtggctgctgtgcgc
tgcgtccagtacgatgggtataaggtggtgagcggtgcctacgactacacagtaaaagtc
tgggatccggagacagagagctgcacccacactttacaaggccacaccaaccgcgtctat
tccctgcagttcgatggcacccacattgtgagtggctcccttgacacctcaatccgcgta
tgggatgctgagagcggcaactgcttgcacaccctgatggggcaccagtccctcaccagc
ggcatggaattgcgggaaaatatcctcgtctctggcaatgctgactccactgtgaaaatt
tgggatatcaaaacgggacagtgcttgcagactcttcaagggcccagtaagcaccagagc
gcagtcacctgcctccagttcagttccaagtttgtcgtgaccagctctgacgacggcaca
gtcaagctgtgggatctcaagacgggggaatttgtgcgcaacctggttgctctggaaagt
gggggcagtgggggggttgtctggcgcatccgtgcctccaacaccaagcttgtgtgtgct
gtgggcagccgcaatggcactgaagaaaccaagctgctggtgctggactttgatgtggac
ctgaaatga
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integrated database retrieval system
