Pituophis catenifer annectens (San Diego gophersnake): 139325180
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Entry
139325180 CDS
T11059
Symbol
LFNG
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae00514
Other types of O-glycan biosynthesis
pcae04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
139325180 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139325180 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcae01003
]
139325180 (LFNG)
Enzymes [BR:
pcae01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
139325180 (LFNG)
Glycosyltransferases [BR:
pcae01003
]
Glycan extension
O-Glycan
139325180 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
139325180
NCBI-ProteinID:
XP_070811053
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MLTGCGQKLLLSLLGSTLTCLLVLMGEQPQGQGFSLGGGQGALLRRLRSGETPGRDPRPP
AGSFSGYFSQLSRAKREAGGGNEQQQQPPXPAREEISPRDVFIAVKTTKKFHKARLELLL
DTWISRNKEMTYIFTDGEDQELKQRMGNVINTNCSSAHSRQALSCKMAVEYDKFIESGRK
WFCHVDDDNYVNVRMLVKLLSSYAHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFAT
GGAGFCISRGLALKMTPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSH
LENLHQVPKSEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSIHCLLYPDTPWCP
PDVVY
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccggctgcgggcagaagctgctgctctcgctgctgggctccacgctgacctgc
ctgctggtgctgatgggggagcagccgcagggccagggcttcagcctggggggcgggcag
ggggctctgctgcgccgcttgaggagcggggagacccccggacgggaccctcggccgccc
gcgggctctttcagcggctacttcagccagctcagccgggccaagagagaagccggcggg
ggcaacgagcagcagcagcaaccgcccnnccccgcccgggaagagatttcgccccgggac
gttttcatcgccgtcaagaccaccaagaagttccataaggcgcggctggagctgctgctg
gacacctggatctcgcgcaacaaggagatgacctacatcttcaccgatggcgaagaccaa
gaactcaagcagagaatgggaaacgtcatcaacaccaattgttcttctgcgcacagtcgc
caagccttatcctgcaagatggcggtggaatacgacaagttcatcgaatccggacgaaag
tggttttgccatgtggatgatgataattacgtgaacgtccggatgttggtcaaactgctc
tccagctatgctcacacgcaggatatctacattggaaaacccagtctggacaggcccatc
caggccaccgagagaatcagcgagaacaagatgcatccggtccacttctggtttgccact
ggtggtgctggtttctgcatcagtcgtggtctggcactgaagatgaccccttgggccagc
ggtgggcacttcatgagcaccgcggaaaagattcgcctccctgatgattgcaccattggg
tacatcatagaatctgtcctgggggtgaaactgatccgaagtaatcttttccactcgcat
ctcgagaatctccatcaagtgcccaaatccgagatccataagcaggtcactttgagttat
gggatgtttgaaaacaagaggaattccatccatatgaagggggctttctcggtggaggaa
gatccttccaggtttcgctccatccattgcttgctctacccggatacgccttggtgtcct
cccgacgtcgtgtactaa
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