Pituophis catenifer annectens (San Diego gophersnake): 139325340
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Entry
139325340 CDS
T11059
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139325340 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139325340 (SMCR8)
Membrane trafficking [BR:
pcae04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
139325340 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
139325340
NCBI-ProteinID:
XP_070811265
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MIGAPDVVAFAKEEAAAEEAAAAAAAAREPGLPEEYSVPLLPAPGRGAHPWSRRGGLGGG
SGASPPPFPRDFLLVAEFSEQVGPQPLLTVPAGEAPGGFDLNYFALRIMSVDYQACAAGA
APGGPYPRLRFARDSQVVLGDSKAGAFAYVHHLTLYDLEARGFVRPFCLAYVSADERKVM
RLFPELAAQFSGASEGLKDGNRRAFARELEKKLHDLDYTRAVLHRETELQKRSLAKGCYT
SRAIEKANELASVEKAIIEHRDLLRQIQSYPPGRRKQASGPPCEPTGEDTQPELLVDDTL
PPPCAQGSSYTPKLIPAKSSKCFDKKLKTLQELCEEQSFSQTLDRLHRIEKMFRGDVCYL
LINRISRALLKQQAFTGFLFEDVSLLDEEQQEKPFEVSLGQNLDPPNMACLESCPSPEIL
VDLASYKSSVESVPIKMDPEVEDGQDPEVSHPVPYDNVELLDVDLKGSVSSGESIEVLGT
EKSATASVHSESQSGLLQAPPSPPVVRDKVTSNRTISGDSIEVLSTCPSEALIPDDFKAS
YPSAINEDPYGGEEEEGFLFNRELNLDSTEEEVEGSPAPEAPPGDASCCTGKESPNFLEG
QANMPPRHGDDDGVVSIQPYRPGDAGFQVNFTDCSHDGVLGGLLAYELDPHYLCDGRETS
KMNLDKCSDSTSYMSSAASTNSDRTPSPAALTGEKSKKAGQSALRFIRQYPFAHPAIYSL
LSGRTLVVLGEDKATVEKLITALSIFVPNSGAYAKPVKHWATSPLQITDFQKWKLVGLQR
STSPGGPNMMHSLSRYSRYISVLDADHKTLRCPQYRGHLILRLADHRTQIKRGSTYHVHV
QTLLTQLCSKAFLYAFCHHLHLPIREGETEDSVTVRRENFLKVQLGLANEDRRVVQYLAE
LLKLQYIQDPIRGVSPVLRFDYLPSSLYKI
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcgcccgacgtggtggccttcgccaaggaggaggcggcggccgaggaggcg
gcggcggcggcggcggcggcgcgcgagccgggcctgcccgaggagtactcggtgccgctg
ctgcccgcgccaggccgcggcgcccacccgtggtcccgtcgaggcggcttggggggcggc
tcgggggcttctccgccgccgttcccgcgcgacttcctgctggtggccgagttctcggag
caggtgggcccgcagccgcttctgacggtgccggccggggaggctccgggcggcttcgac
ctgaactacttcgcgctgcgcatcatgtcggtggactaccaggcctgcgcggcgggggcg
gccccgggaggcccctacccgcgcctgcgcttcgcccgggactcacaggtggtgctgggc
gactccaaggcgggcgccttcgcctacgtgcaccacctgacgctctacgacctggaggct
cgcggcttcgtgcggcccttctgcctggcctacgtgtcggccgacgagcgcaaggtcatg
cgcctcttcccggagctcgcagcccagttctcgggcgcctccgagggcctgaaggacggc
aaccgcagggcctttgcccgcgagctggagaagaagctgcacgacctggactacacgcgg
gctgtgctgcaccgcgagaccgagctgcagaagcgcagcctggccaaagggtgctacacc
agccgggccattgagaaggccaatgagttggccagtgtggaaaaggccatcatcgagcac
cgtgacttgctccggcagatccaatcctacccgcccggtaggcggaagcaggccagcggg
cctccctgcgagccgaccggagaggacacccagccggagttactagttgatgatacgttg
ccaccaccctgtgcccagggctcctcctacaccccgaaactcatcccagccaagtccagc
aaatgctttgacaagaagctgaaaaccctccaggaactctgcgaggagcagtccttcagc
cagaccctcgaccggttgcaccggatcgagaagatgttccggggtgatgtctgctacctc
ctgatcaaccgcatcagcagagccctcctgaagcagcaggcgttcaccggcttccttttc
gaagacgtgtctcttctggacgaagagcagcaggaaaagccctttgaagtcagtctgggt
cagaacctggaccctcccaacatggcttgtttggaaagctgcccgagtcctgagatacta
gtcgatcttgcctcttacaaatccagtgtggagtctgtgccgattaagatggatccagag
gttgaagacggccaagacccagaggtctcccatcctgtcccttatgacaacgtcgaactt
ctagatgtcgacctgaaagggagcgtcagcagcggcgaaagcattgaagttttgggaacg
gagaaatcggccacagcttctgtccactctgaaagtcagtctggcttgctacaagcaccc
cccagcccccctgtggtgagggacaaagtcaccagcaacagaaccataagcggggacagc
atcgaagtcctcagtacctgcccctcggaggccctgatcccagacgattttaaagcaagc
tacccaagtgccattaacgaagatccttatggtggcgaagaagaggaaggtttcctgttc
aaccgcgagttaaatctggacagcaccgaagaggaggtggaaggcagccctgcgcctgaa
gcccctccgggggatgcttcttgctgcactggcaaagagagccccaacttccttgaaggt
caagccaatatgcctcccagacatggtgatgacgatggcgtggtcagcatacagccatac
aggccaggtgatgcagggtttcaggtgaacttcacagactgctcccacgatggagtcctg
ggaggcctccttgcctatgaacttgatccccattacctctgtgacggccgagaaaccagt
aaaatgaacctggataagtgctcggattccacgagttacatgagcagcgcggcgtccacc
aactccgacagaaccccatcccccgctgctctcacaggagaaaagtccaagaaggccggg
cagagcgccttgcgcttcatccggcagtaccccttcgcccaccccgctatctactctctg
ctgagcgggaggaccctggtggtgctgggagaagacaaggccactgtggagaagctcatc
accgctctctccatttttgtccccaattccggcgcgtacgccaagcctgtgaagcactgg
gccacctcgcctttgcagatcacggactttcagaagtggaagctggtggggctccagagg
tcaacctctccaggtggccccaacatgatgcattctctcagccgatacagccgatacatc
agcgtgctggacgccgaccacaagaccctccgctgtccgcaataccgagggcacctgatc
ctccggctggccgaccaccgcacccagatcaagcgggggagcacctaccacgtgcacgtc
cagaccctcctcacccagctctgctccaaggccttcctctacgccttctgccatcacctg
cacctccccatccgagagggagagacggaggactctgtcactgtgcggcgggagaacttc
ttgaaagtccagctgggtctggcaaacgaggaccgcagagtggtccagtatctggccgag
cttctgaaattgcagtacattcaggatcccatccgcggggttagccccgtgctcaggttc
gattacctgcccagctctttgtacaaaatttag
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