KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139325827
Entry
139325827         CDS       T11059                                 
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04010  MAPK signaling pathway
pcae04137  Mitophagy - animal
pcae04141  Protein processing in endoplasmic reticulum
pcae04210  Apoptosis
pcae04217  Necroptosis
pcae04621  NOD-like receptor signaling pathway
pcae04622  RIG-I-like receptor signaling pathway
pcae04920  Adipocytokine signaling pathway
pcae05132  Salmonella infection
pcae05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    139325827 (TRAF2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    139325827 (TRAF2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    139325827 (TRAF2)
  09143 Cell growth and death
   04210 Apoptosis
    139325827 (TRAF2)
   04217 Necroptosis
    139325827 (TRAF2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    139325827 (TRAF2)
   04622 RIG-I-like receptor signaling pathway
    139325827 (TRAF2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    139325827 (TRAF2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    139325827 (TRAF2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139325827 (TRAF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcae03019]
    139325827 (TRAF2)
   04121 Ubiquitin system [BR:pcae04121]
    139325827 (TRAF2)
Enzymes [BR:pcae01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139325827 (TRAF2)
Messenger RNA biogenesis [BR:pcae03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     139325827 (TRAF2)
Ubiquitin system [BR:pcae04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    139325827 (TRAF2)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING SSNA1 zf-C3HC4_2 zf-RING_6 zf-RING_4 zf-RING_5 zf-C3HC4_5 SLX5_C MATH DUF8512
Other DBs
NCBI-GeneID: 139325827
NCBI-ProteinID: XP_070811949
LinkDB
Position
Unknown
AA seq 527 aa
MASANATPPGSLDVNQPGFPKEILGTELVGKYLCSECRNILRRPFQAQCGHRYCSFCLKK
ILSSGPQKCAACLQEGLYEEGASILEPGVAFPDNAARREVESLPAICPHQGCTWKGSIKE
YESCHEGSCPAMLVACPACHGLVRLGEKEHHAEQECPERSLSCKYCQALFHFSESKAHEA
VCPKFPLACEGCGKKMIPREKFLEHVKTCSKCRAPCRFQPVGCTHLMENEKLPEHERSHL
GEHLYMLLSFVLSLGSASSKLEPLLDRLSAEAGCILAGGRPLVPEAELPSSLELLGKCEA
LERKTVTFENIVCVLNREVEKVSLVAEAASRQHQLDQEKIEALSTKVRQLERSIALKDLA
LAEMEHTIQEMEAASYDGIFIWKISDFARKRQEAVAGRSPAIFSPAFYTSKYGYKMCLRI
YLNGDGTGRGSHLSLFFVVMKGPNDSLLRWPFNQKVTLMLLDQNNREHVIDAFRPDVASS
SFQRPISDMNIASGCPLFCPLAKMESKNSYVREDTIFIKAIVDLTGL
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggcatcggccaacgcaacccctcctggctctttggacgtaaaccagccaggcttccct
aaggagattctgggcactgaactggtgggcaagtacctgtgttcagagtgccggaatatt
ttgcggcggccatttcaagcccagtgtggtcatcgctactgctccttttgcttgaagaag
atcctaagctcagggccccagaagtgtgcagcctgccttcaagaggggttgtacgaagaa
ggcgcctcgatcttggaaccaggggtggctttcccagataacgcagctcggcgggaagtg
gagagtctcccggccatctgtccccaccaaggttgcacatggaaaggctccataaaagaa
tatgagagctgtcacgaagggagctgcccggccatgctggtggcctgtcctgcgtgtcac
ggcctggtcaggctaggcgagaaggagcaccacgccgagcaggagtgtcccgagaggagc
ctcagctgcaaatactgccaagctcttttccacttctctgaaagcaaggcccacgaggct
gtgtgccccaaatttcccctggcctgcgagggctgcggaaagaagatgatcccccgggag
aagtttctggagcacgtcaagacctgcagcaaatgcagagccccctgcagattccagccg
gtcggctgcacccacctgatggagaacgagaagctccccgagcacgagaggagccacctg
ggcgagcacctctacatgctgctgagtttcgtgctgagcttgggctctgcgtccagcaag
ctggagcccctgctggaccgcctctcggcggaggctggctgcatcctggcggggggcagg
cccctggttccagaggcagagctgcccagctctttagaactgctggggaaatgcgaggcc
ctggagaggaagacagtcacttttgagaacatcgtctgtgtgctgaaccgggaggtggag
aaggtgtcgctcgtggccgaagccgccagccgccagcatcagcttgaccaggagaagatc
gaggccctcagcactaaggtgcggcaactggagagaagcattgccttgaaggacctggcc
ctggccgagatggagcacaccatccaggagatggaagcggcctcctacgatggcatcttc
atctggaagatttcggactttgccaggaagcggcaggaggcagtcgcggggcgctctccg
gccatcttctccccagccttctacaccagcaagtacggctacaagatgtgcctgcggatc
tacctcaatggggacggcaccgggcgtggcagccacctgtctctcttcttcgtggtaatg
aaagggcccaatgactccctcctgcggtggcctttcaaccagaaggtcaccctgatgctg
ctggaccagaataaccgcgaacacgtcattgacgccttccggcccgatgtggcctcctcc
tccttccagcggcccatcagcgacatgaacattgccagtggctgccccctcttctgcccc
ctcgccaagatggagtccaagaactcctacgtgcgcgaagacaccatcttcattaaagcc
attgtagacctcacgggcctttaa

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