Paraburkholderia caffeinilytica: DSC91_001921
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Entry
DSC91_001921 CDS
T06448
Name
(GenBank) RND transporter
KO
K18903
outer membrane protein, multidrug efflux system
Organism
pcaf
Paraburkholderia caffeinilytica
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_001921
01504 Antimicrobial resistance genes [BR:
pcaf01504
]
DSC91_001921
Transporters [BR:
pcaf02000
]
Other transporters
Pores ion channels [TC:
1
]
DSC91_001921
Antimicrobial resistance genes [BR:
pcaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
DSC91_001921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TPR_27
DUF7061
Motif
Other DBs
NCBI-ProteinID:
AXL49931
LinkDB
All DBs
Position
1:complement(2065546..2067102)
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AA seq
518 aa
AA seq
DB search
MALAAAASAALLAACTVGPDYQRPQAEVPPIWQTDSYWRVAAPSHAPISLDWWSAFGDPT
LGTLETQALAQNQTLAAASAHYAQAKATLANTRAQQIPEVDLGASGSRFRISHDRPLTNY
GTPTTSTVQNNLQLGSTINYDTDLFGRIRREVEGATASAQQSADDLANARLVLTTELATN
YFSLRELDAEIDVLNQSVKLQQRALDYVTAEHDLGAVSGLDVLQQKSLLDSTRVQAQLLL
NQRAQFEHAIAALVGVPAPQFAIEPKVLDAPVPAIPLGLPSDVLQRRPDVASAERAMAAA
NAQIGVARAAFFPSLTLTPSIGWQSTQFASLLSAPTLAWTLGATVGQVLFDGGRRAANVQ
FASEGYKATEANYRQTVLNAFQQVQDGITGLSVLDGAAKQSHEAVTDAQHLLALANDRYS
GGLVAYLDVITAQQSLLNSERQDVQIHGQQMTVSVALVKALGGGWDAGTNLSGAQPPGDT
SNAANVASAANISNVASASNVANTPNAADTKEAMAPAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcggccgccgcgagcgcggctttgctggcggcgtgcacagtcggcccggat
tatcagcggccgcaagccgaggtgccgccgatctggcagaccgattcgtactggcgcgtc
gcggcgccttcgcatgcgccgatttcgctggactggtggagcgcgttcggcgatccgacg
ctcggtacgctggaaacgcaggcgctcgcgcagaatcagacactggccgcggcgagcgcg
cactacgcccaggccaaggcgacgctcgcgaacacccgtgcgcagcagattcctgaagtc
gatctgggggcgtccggatcgcgcttcagaatttcgcatgatcgcccgctgaccaattac
ggcacgcccacgacgtcgacggtgcagaacaatctgcaactcggctcgacgatcaactac
gacaccgatctattcggccggatacgtcgtgaagtggaaggcgccacggcctccgcgcag
caatcggctgacgatctcgccaacgcacggctcgtcctcaccaccgaactcgccacaaac
tatttctcgctgcgtgaactcgatgccgagatcgacgtgctgaatcaatcggtgaaactg
cagcaaagggcactcgattacgtcaccgcggagcacgacctcggcgcggtgtccgggctc
gacgtgttgcagcagaaatcgttgctcgattcgacgcgcgtgcaggcgcaactcctgctg
aatcagcgggcgcagtttgaacatgcgattgccgcgctggtcggcgtgcccgcgccgcag
ttcgccatcgagcccaaagtgctcgacgcgccggtaccggcgattccgctgggcttgccg
agcgacgtattgcaacgacgcccggatgtcgcatcggcggagcgcgcgatggccgcggcg
aacgcgcagatcggcgtcgccagggcggcgttctttccgagcctgacgctgacgccgagc
atcggctggcaaagcacgcagtttgcgagcctgctgagcgcgccgacgctggcgtggacg
ctcggcgcgaccgtcggccaggtgttgttcgacggcggccggcgcgcggcgaacgtgcaa
tttgcgagcgaaggctacaaggccaccgaagcaaactaccggcaaaccgtgctcaacgcg
ttccagcaggtgcaggacggcatcacgggcctctctgttctcgacggcgcggcgaagcag
tcgcacgaggcggtgaccgatgcgcagcatctgctggcgcttgccaacgaccgttattcg
ggtggcctcgtcgcctatctcgacgtcatcaccgcgcagcagtcgttgctcaacagcgag
cgtcaggacgtgcagatccacggccagcagatgaccgtctcggttgcgttggtgaaggcg
ctgggcggcggctgggatgccggcacgaacctgtcgggcgcgcagccgcccggtgataca
tcgaacgcggcgaacgtagcgagtgcggcgaacatatctaacgtagcgagtgcctcgaac
gtagcgaacacaccgaacgcggcggacacgaaggaggcgatggctcccgcgaagtga
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