Paraburkholderia caffeinilytica: DSC91_003949
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Entry
DSC91_003949 CDS
T06448
Name
(GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00010
Glycolysis / Gluconeogenesis
pcaf00020
Citrate cycle (TCA cycle)
pcaf00620
Pyruvate metabolism
pcaf00785
Lipoic acid metabolism
pcaf01100
Metabolic pathways
pcaf01110
Biosynthesis of secondary metabolites
pcaf01120
Microbial metabolism in diverse environments
pcaf01200
Carbon metabolism
pcaf01210
2-Oxocarboxylic acid metabolism
Module
pcaf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DSC91_003949
00020 Citrate cycle (TCA cycle)
DSC91_003949
00620 Pyruvate metabolism
DSC91_003949
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DSC91_003949
Enzymes [BR:
pcaf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
DSC91_003949
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
DUF3135
Motif
Other DBs
NCBI-ProteinID:
AXL51331
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Position
2:complement(671790..674486)
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AA seq
898 aa
AA seq
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MSAVPDEVMKYVAAEKDDDPQETGEWLEALDGVISAVGPDRAHYLIEKQIEFARVHGEHL
PFSANTPYINTIPVSRQAPIPGDQDLEHRIRSYTRWNAIAMVLRAGKDTNVGGHIASFAS
AATLYDVGYNHFWHAPSAEHGGDLVFVQGHSSPGVYSRAFLLGRLTENQLDNFRQEVGGE
GISSYPHPWLMPDFWQFPTVSMGLGPIMAIYQARFMKYMQARGIAKTEGRKVWAFLGDGE
TDEPESLGAIGMAGRERLDNLVFVINCNLQRLDGPVRGNGKIIQELESEFRGAGWNVIKV
VWGSRWDALFQRDKSGALMRRMMEVVDGEYQTYKSESGAYVREHFFNTPELKALVADWSD
EDVWNLNRGGHDPHKIYAAFTEATNAKGQPTVILAKTIKGYGMGEAGQAMNITHQQKKLH
VDQLKKFRDQFRLPISDEDLVHVPYLKFEEGSKELEYMRARRQDLGGYLPARRQKADSLP
VPALDAFEPLLKGTGEGREISTTMAFVRILNILLKDKSLGKRIVPIVPDESRTFGMEGLF
RQIGIWNQEGQKYVPEDSDQLMFYRESESGQILQEGINEAGGMCDWIAAATSYSTHGEIM
IPFYIFYSMFGFQRIGDLAWAAGDMRSRGFLLGGTAGRTTLNGEGLQHEDGHSLLWAASV
PNCISYDPTFGYELAVIMQDGLRRMVADQEDVYYYITVMNENYEHPAIPQGDAVAADIIK
GMYAFRKAEADAKAPRVQLMGAGTIFNEVIAAADLLKNDWGVAADLWSVPSFTELAREGH
EVQRWNLLHPTEEKKLSHVEKLLKGAQGPVIASTDYVRALTEQIRAFVPQKFVVLGTDGY
GRSDTREKLRHFFEVDRYWVTVAALNALADEGTIERKVVAEALKKYNLDPAKPNPMTV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgtacccgacgaagtcatgaaatatgtcgccgctgaaaaagacgacgatccc
caggaaaccggcgaatggcttgaagcgctggatggcgtgatttctgctgtgggccccgac
cgcgctcactacctgatcgaaaaacaaatcgaattcgcccgcgtgcacggcgaacatttg
ccgttctcagcaaacaccccctacatcaatacgattcccgtgtcgcgtcaggcgccgatt
cccggcgaccaggacctcgagcaccggattcgctcgtacacgcgctggaacgccattgcc
atggtgctgcgcgcgggcaaggacacgaacgtcggcggccatatcgcctcgttcgcgtcg
gccgccacgctgtacgacgtcggctacaaccacttctggcatgcaccgtcggccgaacat
ggcggcgacctcgtgttcgtgcagggccactcgtcgccgggtgtgtactcgcgcgcgttc
ctgctcggccgtctgaccgaaaaccagctcgacaacttccgtcaggaagtgggcggcgag
ggcatctcgtcgtacccgcacccgtggctgatgccggacttctggcaattcccgaccgtc
tcgatgggcctcggcccgatcatggcgatctaccaggcgcgtttcatgaagtacatgcag
gcgcgcggcatcgcgaagaccgaaggccgcaaggtctgggccttcctcggcgacggcgaa
acggatgaaccggaatcgctcggcgcaatcggcatggccggccgcgaacgcctcgacaac
ctcgtgttcgtgatcaactgcaatctgcagcgcctcgacggtccggtgcgcggcaacggc
aagatcatccaggaactcgaaagcgaattccgcggcgccggctggaacgtcatcaaggtc
gtctggggcagccgctgggatgcgctgttccaacgcgacaagtcgggcgcgctgatgcgc
cgcatgatggaagtcgtcgacggcgaataccagacgtacaagtcggagtcgggcgcgtat
gtgcgcgaacacttcttcaacacgccggaactgaaggcgctggtcgccgactggtccgac
gaggacgtgtggaacctgaaccgtggcggccacgatccgcacaagatctacgcggcgttc
accgaagccacgaacgccaagggccagccgaccgtcatcctcgcgaagacgatcaagggc
tacggcatgggcgaagccggccaggcgatgaacattacccaccagcagaaaaagctgcat
gtggaccagctgaagaaattccgcgaccagttccgtctgccgatctccgacgaagacctc
gtccacgtgccgtacctcaagttcgaagaaggctcgaaggaactcgagtacatgcgcgct
cgccgtcaggacctcggcggctatctgccggcgcgtcgccagaaggccgactcgctgccg
gtgccggcgctcgacgcgttcgagccgctgctgaagggcacgggcgaaggccgcgagatc
tccacgacgatggcgttcgtgcggatcctgaacatcctgctgaaagacaagtcgctcggt
aagcgcatcgtgccgatcgtgccggacgagtcgcgtaccttcggtatggaaggcctgttc
cgtcagatcggtatctggaatcaggaaggccagaagtacgtgccggaagattccgaccag
ctgatgttctaccgcgaatcggaatccggccagatcctgcaggaagggatcaacgaagcc
ggcggcatgtgtgactggatcgcagccgcgacgtcgtattcgacgcacggcgagatcatg
atcccgttctacatcttctactcgatgttcggcttccagcgcatcggcgatctggcctgg
gcggcgggcgacatgcgttcgcgcggtttcctgctgggcggcacggccgggcgcacgacg
ctgaacggcgaaggtctgcaacacgaagacggccactcgctcctgtgggcggcatcggtg
ccgaactgcatcagctacgacccgacgttcggttacgaactcgcggtcatcatgcaggac
ggtctgcgtcgcatggttgccgaccaggaagacgtgtactactacatcacggtgatgaac
gagaactacgagcacccggcgattccgcagggcgatgctgtagcggccgacatcatcaag
ggtatgtatgccttccgcaaagcggaagccgacgcaaaggcgccgcgcgtgcaactgatg
ggcgcgggcacgatcttcaacgaagtgatcgccgctgccgatctgctgaagaacgactgg
ggcgtcgctgccgatctgtggagcgtgccgagcttcaccgaactggctcgcgaaggtcac
gaagtgcagcgctggaacctgctgcacccgacggaagagaagaagctctcgcacgtcgag
aagctgctgaagggtgcgcaaggtccggtcatcgcatcgaccgactacgtgcgcgcgctg
accgagcagatccgcgcgttcgtgccgcagaagttcgtcgtgctgggcacggatggctat
ggccgttcggacacgcgcgaaaagctgcgtcacttcttcgaagtcgaccgctactgggtc
acggttgccgcgttgaatgcactggcagacgaaggcacgatcgaacgcaaggtcgtcgcc
gaggcgctcaagaagtacaaccttgatcccgccaaacccaacccgatgaccgtctaa
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