Paraburkholderia caffeinilytica: DSC91_004670
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Entry
DSC91_004670 CDS
T06448
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf01501
beta-Lactam resistance
pcaf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSC91_004670
01503 Cationic antimicrobial peptide (CAMP) resistance
DSC91_004670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_004670
01504 Antimicrobial resistance genes [BR:
pcaf01504
]
DSC91_004670
Transporters [BR:
pcaf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DSC91_004670
Antimicrobial resistance genes [BR:
pcaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DSC91_004670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AXL51857
LinkDB
All DBs
Position
2:complement(1421683..1424892)
Genome browser
AA seq
1069 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIILMLAGIASVFTLPIAQYPTIAPPAVQISAVYPGASAKTVEDT
VTQVIEQQMSGLDHLLYLSSTSDDSGTATITLTFAAGTNPDIAQVQVQNKLQLATPLLPT
IVQQQGINVTKSSSSFLLVLAFNSEDGSMNKIDLANYVASNVKDPISRLDGVGTVTLFGT
QYAMRIWLDASKLNKFNLTPVDVQTALQAQNVQVAGGSLGGTPSVPGQMLQATITEATLL
NTPEQFGNVLLKVNTDGSQVRIRDVGRVELGGENYNFDTHYNGKPTAGLGIQLATGANAL
QTAKNVKSKIDDLSKYFPHGLVVKYPYDTTPFVRLSIEDVVKTLLEGIVLVFLVMYLFLQ
NLRATLIPTIAVPVVLLGTFAIMSAVGFSINVLSMFGLVLAIGLLVDDAIVVVENVERVM
AEEGLSPRDATRKAMEQITGALVGVALVLSAVFVPVAFSSGSVGAIYRQFSLTIVAAMVL
SVLVALILTPALCATILKPIPKGHHEVKKGFFGWFNRTFETSRDKYHSGVHHVIKRSGRW
LIIYLVVIVAVGLLFVRLPKSFLPDEDQGIMFVLVQTPAGSTQERTAHALQDVSDYVLNQ
EKDIVESAFTVNGFSFAGRGQNAGLVFVKLKGYAERQHTNQKVQALIGRMFMHFSSYKDA
LVYPVNPPSIPELGTASGFDFELQDRSGLGHAKLMEARNMLLGMAAKDPLLAQVRPNGLN
DTPQFKISIDHEKASALGVSLSAIDQTFSIAWASVYVNNFLDTDGRIKKVYVQGDAPFRM
NPEDLNNWYVRNASGGMAPLNSFASGSWTYGSPKLERYNGISAVEIQGAAAQGKSTGQAM
GAMEAIAAKLPAGIGYEWTGLSLQERQSGSQAPILYGISILVVFLCLAALYESWSIPFSV
IMVVPLGVVGALLAATLRGLENDVFFQVGLLTTVGLSAKNAILIVEFARELQQGQGMGPI
EAALEAARLRLRPILMTSLAFILGVMPLAISNGAGSASQHAIGTGVIGGMLTATFLAIFM
IPMFFVVVRAKFGGEQEDPDAALEHYNQHHPRDPQGGASDGNGSGKDGH
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttctttattgatcgcccgatttttgcatgggtgatcgccatcatcctgatg
ctcgcgggtatcgcgtcggtgtttacgctgccgatcgcgcaatatccgaccatcgcgcct
ccggcggtgcagatcagcgccgtgtatccgggcgcgtcggcgaagacggtggaagacacc
gtcacgcaggtgatcgagcagcagatgagcggcctcgaccacctgctgtacctgtcgtcc
acgtcggacgactccggtacggcgaccatcacgctgacgttcgcggccggcacgaatccg
gacatcgcccaggtgcaggtgcagaacaagctgcaactggcgacgccgcttctgccgacc
atcgtgcagcagcaagggattaacgtcaccaagtcgagcagcagcttcctgctcgtgctg
gcgttcaattccgaagacggcagcatgaacaagatcgacctcgcgaactatgtcgcgtcg
aacgtcaaggacccgatcagccgtctcgacggcgtgggtaccgtgacgctgttcggcacg
cagtacgcaatgcggatctggctcgatgcgtcgaagctgaacaagttcaatctgacgccg
gtcgatgtccagaccgcgctgcaggcgcagaacgtccaggtggccggcggctcgctgggc
ggtacgccttcggtgccgggccagatgctgcaggccacgattaccgaggcgacgctgctg
aatacgcctgagcagttcggcaacgtgctgctgaaggtgaacacggacggctcgcaagtg
cgcatcagggacgtcgggcgcgtcgagctgggcggcgaaaactacaacttcgatacgcac
tacaacggcaagccgacagcgggtctcggcattcagctcgcgacgggcgccaacgcgctg
cagaccgcgaagaacgtgaagtcgaagatcgacgatctgtcgaagtacttcccgcacggc
ctcgtcgtgaagtacccgtatgacacgacgccgttcgtgcgcctgtcgatcgaagacgtg
gtgaagacgctgctcgaaggcatcgtgctggtgttcctcgtgatgtacctgttcctgcag
aacctccgcgcgacgttgattccgacgatcgcggtgccggtggtgctgctgggcacgttc
gcgatcatgagcgcggtgggcttctcgatcaacgtgctgtcgatgttcggcctggtgctc
gcaatcggtctgctggtggacgatgcgatcgtggtggtggaaaacgtcgagcgggtgatg
gccgaggagggactgtcgccacgcgacgccacccgcaaggcaatggagcagatcaccggc
gcgctggttggcgtggcgctcgtgctgtcggcggtgtttgtgccggtcgcgttctcgagc
ggttcggtcggtgcgatttaccggcagttctcgctgacgatcgtggcggcgatggtgttg
tcggtgctggtcgcgttgattctcacgccggcgctgtgcgcgacgattctcaagccgatc
ccgaagggccatcacgaagtgaagaagggcttcttcggctggttcaaccggaccttcgag
acgagccgcgacaagtaccactccggcgtgcaccacgtgatcaagcgttcgggccggtgg
ctcatcatctacctggtggtgatcgtcgcggtcggtctgctgttcgtgcgtctgccgaag
tcgttcctgcctgacgaagaccaggggatcatgttcgtgctggtgcaaacgccggccggc
tcgacccaggagcgtacggcgcatgcccttcaggatgtgtccgactacgtgctgaaccag
gaaaaggacatcgtcgaatcggcgtttacggtgaacggattcagcttcgcgggccgcggc
cagaatgccggtctcgtgttcgtgaagctgaagggctacgccgagcgccagcatacgaac
cagaaggtgcaggcgttgatcggccggatgttcatgcacttctcgtcgtacaaggacgcg
ttggtgtatccggtgaatccgccgtccattccggaactgggcacggcatcggggttcgac
ttcgagttgcaggatcggagcggtctgggccacgcgaagctgatggaagcgcgcaacatg
ctgcttgggatggccgcgaaggatccgctgctcgcgcaggtgcgtccgaacggcctgaac
gatacgccgcagttcaagatctcgatcgatcacgaaaaggcgtcggcgttgggcgtgtcg
ctgtcggcaatcgatcagacgttctcgatcgcgtgggcctcggtctatgtgaacaacttc
ctcgataccgatggccggatcaagaaggtgtacgtgcagggcgatgcaccgttccgcatg
aatccggaagatctgaacaactggtacgtgcgcaacgcatcgggcgggatggcgccgctc
aactcgtttgcgtccggcagctggacatatgggtcgccgaagctcgaacgctacaacggt
atctccgctgtcgaaatccagggcgcggcagcccagggcaagagtaccggccaggcgatg
ggagccatggaagccatcgcggcgaagctgccggcgggtatcggctacgaatggacaggt
ctgtcgttgcaggaacgccagtccggttcgcaggcgccgattctgtacggtatttcgatc
ctcgtcgttttcctgtgtctcgccgcgttgtatgaaagctggtcgatcccgttctcggtg
atcatggtggtgccgctcggcgtggtgggcgcactgctggccgctacgctgcgtgggctc
gagaacgacgtgttcttccaggtgggtctgttgaccacggtggggctgtcggcgaagaat
gcgattctgatcgtggagttcgcccgggaactgcagcagggtcaaggcatggggccgatc
gaggccgcgctggaagcggcgcgtctgcggttgcgtccgattctgatgacttcgcttgcg
ttcattctcggcgtgatgccgctcgcgatcagtaacggcgcgggctcggccagccagcac
gcgatcggtaccggcgtgatcggcgggatgttgacggcgaccttcctcgcgattttcatg
atcccgatgttcttcgtcgtggtccgcgcgaagttcggcggcgaacaggaagacccggat
gcagcgctcgaacactacaaccagcaccatccgcgtgatccgcaaggcggcgcgtcggac
ggtaacggctcgggcaaggacggacattga
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