Paraburkholderia caffeinilytica: DSC91_004894
Help
Entry
DSC91_004894 CDS
T06448
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00300
Lysine biosynthesis
pcaf00550
Peptidoglycan biosynthesis
pcaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSC91_004894
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSC91_004894
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcaf01011
]
DSC91_004894
Enzymes [BR:
pcaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DSC91_004894
Peptidoglycan biosynthesis and degradation proteins [BR:
pcaf01011
]
Precursor biosynthesis
Amino acid ligase
DSC91_004894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AXL52024
UniProt:
A0ABQ1N9C6
LinkDB
All DBs
Position
2:complement(1648937..1650484)
Genome browser
AA seq
515 aa
AA seq
DB search
MSALRKKHPAHRQIADALNWLHAHVQPGAHLHADTRSLAAGDAFFAYAVDGADNRPFIDG
AIERGAAAVLVQPEGFSGAIDSSTTLAVPALNELAGSIASAWYADPSDGMLAIGITGTNG
KTSCSQWISAALTALGKRCAIIGTLGTGLPGQLVHTGFTTPDAPQLQRSLAQLRDAGAQA
VAMEVSSHALHQGRVNGTAFDIAVFTNLTQDHLDYHGTFEAYETAKARLFAWPELRAAVI
NRDDAAGRRLLASTKSHARTIAYGLDEVLKDGPQADAWLLASNVRATATGTAFHLTTSDW
GSAEVDVQTLGAFNVSNLLGVLGALLAADVPFDAALAELAKLEPVNGRMQRLGGRLQNDE
PLVVIDYAHTPDALEKTLEALRPMAAARGGELICMFGCGGDRDATKRPLMGAIAEKLADG
VVVTSDNPRSEDPQSIIEQIAAGMKDASKARRIEDRASAILQAIRGAAREDVIVLAGKGH
EATQEIMGKKRAFSDQDHARLALAARATHVRGGGE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctgcgtaagaagcatccggcgcaccggcaaatcgccgacgcactcaactgg
ctgcacgcccacgtgcagccaggcgcgcatctgcacgccgacacgcgctcgctcgccgcg
ggcgacgcgttctttgcctatgccgtcgacggcgcggataaccgcccgtttatcgacggc
gcgatcgagcgtggcgcggcggccgtgctggtgcagcccgaaggctttagcggtgcgatc
gattcatctacgacattggccgtgccggcattgaacgaactggccggttcgattgcgagc
gcctggtatgccgatccgagcgacggcatgctggcgatcggcatcaccggcacgaacggc
aagacgtcctgcagccaatggatttccgcggccttgaccgcactcggcaagcgttgcgcg
atcatcggcacgctcggcaccggtctgccggggcaactggtgcacacgggcttcacgacg
cccgacgcgccgcaactgcaacgcagtctcgcgcaattgcgcgacgcgggtgctcaagca
gtggcgatggaagtgtcgtcgcacgcgctgcaccaaggccgtgtgaacggcacggcgttc
gacattgccgtgttcacgaatctcacgcaagaccacctcgactatcacggcacgttcgaa
gcttacgaaaccgccaaggcacgtctgtttgcgtggccggaattgcgcgccgcggtgatc
aatcgcgacgatgccgccggtcgccgcctgctcgcgagtaccaagagccatgcacgcacg
atcgcctacggtctcgatgaagtgctcaaggatgggccgcaagccgatgcctggttgctc
gcttcgaatgtgcgagcaaccgcgactggcaccgcgttccatctgaccacatcggactgg
ggcagtgcggaagtcgacgtgcaaacgctcggcgcattcaacgtcagcaatctgctcggc
gtactcggcgcattgctcgccgccgacgtgcccttcgacgccgcgcttgccgaactggcg
aagctcgagccggtaaatggccgcatgcaacgtcttggcggccgcttgcagaacgacgag
ccgctggtcgtgatcgattacgcgcatacgccggacgcgctggaaaagaccttggaagcc
ttgcgcccgatggcggccgcacgcggcggcgaactgatctgcatgttcggctgcggcggc
gaccgcgacgcgaccaagcgtccgctgatgggcgcgatcgccgagaagctggccgatggc
gtggtcgtgaccagcgacaacccgcgcagcgaagatccgcagtcgatcatcgagcaaatc
gctgcaggcatgaaagacgcgtcgaaggcgcgccgtatcgaggaccgcgcgagcgcgatc
ctgcaagcgatccgcggcgccgcccgggaagacgtcatcgtgctggccggcaaggggcat
gaagcaacacaggaaatcatgggtaagaagcgcgctttctccgatcaggaccatgctcgc
cttgcgctcgccgcacgggcaacgcacgtacgcggaggtggcgaatga
DBGET
integrated database retrieval system
