KEGG   Paraburkholderia caffeinilytica: DSC91_006301
Entry
DSC91_006301      CDS       T06448                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
pcaf  Paraburkholderia caffeinilytica
Pathway
pcaf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DSC91_006301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcaf03400]
    DSC91_006301
Enzymes [BR:pcaf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     DSC91_006301
DNA repair and recombination proteins [BR:pcaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DSC91_006301
 Prokaryotic type
     DSC91_006301
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 RecR_HhH EndIII_4Fe-2S HHH_8
Other DBs
NCBI-ProteinID: AXL53048
LinkDB
Position
2:complement(3138453..3139097)
AA seq 214 aa
MNANKRRAIYETLQSLNPHPTTELEYTTPFELLIAVLLSAQATDVSVNKAMRKMFPVANT
PQKVFDLGEEGVAGYIKTIGLYRTKAKNVIATCRILLDQYGGDVPEDREALESLPGVGRK
TANVILNTAFGHPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKFTPAEFKQDAHHWLI
LHGRYVCKARRPECWHCVIEPLCEFRPKTPPPDL
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaacgcgaataaacgccgcgctatctacgagacgcttcagagtctcaacccgcatccc
acgaccgagctcgaatacacgacaccgttcgaactgctgatcgccgtgctgctgtcggcg
caggccaccgacgtgtcggtgaacaaggcgatgcgcaagatgttcccggtcgcgaacacg
ccgcagaaagtcttcgatctcggcgaagaaggggtggccggctacatcaagacgattggc
ctctatcggaccaaggcgaagaatgtgatcgcaacctgccgcattctgctcgaccagtac
ggcggcgacgtgccggaagatcgcgaagcgctcgaaagcttgcctggggtcggccgcaaa
acggcgaatgtgatcctgaacacggcgttcggtcatccaaccatcgccgtcgacacgcat
atctttcgggttgcgaatcgaactggcctcgcgcctggcaaagacgtgcgcgcggtcgaa
gcggcgctggagaaattcacgcccgccgagttcaagcaggacgcccaccactggctgatt
ctgcacggccgctatgtatgcaaagcgcgccgcccggaatgctggcactgcgtgatcgag
ccgctgtgcgaattccggcccaagacgccgccgccggatctttga

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