KEGG   Paraburkholderia caffeinilytica: DSC91_007170
Entry
DSC91_007170      CDS       T06448                                 
Name
(GenBank) type IV secretion system protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
pcaf  Paraburkholderia caffeinilytica
Pathway
pcaf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcaf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DSC91_007170
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcaf02044]
    DSC91_007170
Enzymes [BR:pcaf01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     DSC91_007170
Secretion system [BR:pcaf02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   DSC91_007170
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind TFA2_Winged_2
Other DBs
NCBI-ProteinID: AXL53645
LinkDB
Position
2:4059613..4061334
AA seq 573 aa
MDSMPAIVVGVWRGRYLRFTGQQFVLLAAPARSGKGVGIVIPNLLSFPDSVVVLDVKQEN
YAITAGFRHAYGQDVYLFNPFAEDGRTHRYNPLSAISDGLFRVGEILAIGYALYPPGGHD
DFWKDQARNLFLGIVLLLCEWRDARRAGKGASTPDYPVTMGEVLRQSSGNGMPVKAYLQR
ALVQHRSLLTGPCIDALNRFLSNDEKVLASILATFNAPLTIWAIPIVDAATSANDFDLRD
VRKRRMSVYIGITPDHLSEAALLVNLVFSQLVNLNTKQLPESDPTLKFQCLVLLDEMTAI
GKIHIIARAVAYMSGYNLRLLSIVQSIAQLESVYGRADARTFVTNHAMQILYAPREQKDA
NDYSEMLGTFTDQSRSVSRSNAIFGGRGGSSESVSEQRRPLLLPQELKELGREKEIIVLE
NTKPILADKICYWRDPEFVSRVMAAPSVPTMNLARFSIVVERRLRELRTDEIDSEGTGLI
NPAAEYLEVLQAWDPRDLPPSLDDISEDDAVAYVERHFMLLGVPEERVRKATRRLSVADL
DAAELSSIEPSRPCRTSARRVPSNVVPIQGGGR
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggattcgatgcctgccattgtcgttggtgtttggcgtgggcgttatctgcgctttacc
ggtcagcagttcgtcttgctggcggcgcccgcgcgttcgggcaagggcgttggcattgtg
atcccgaatctgctcagtttccccgattcggtggtggtgctcgacgtcaagcaggaaaac
tacgccattaccgcaggcttcaggcatgcatacgggcaggacgtctatctgttcaacccg
ttcgcggaagatggtcgcacgcatcggtacaaccctctttcggcgatctcggatggattg
ttccgagttggtgaaattctcgcgattggttacgccctctatccgccgggtggacatgac
gatttctggaaggatcaggcgaggaacctgtttcttggcatcgtgctgctgctgtgcgag
tggcgtgatgcgcgccgcgctggcaagggagcgtcgactccggattatccggtcacaatg
ggagaggtgttgcggcagtcttcgggtaatggcatgccagtgaaagcctaccttcagcgg
gcactcgttcagcatcgtagtctgctgactgggccgtgtatcgatgcgctgaatcgtttt
ctctcgaacgacgaaaaggtgctggccagcattctcgcgactttcaatgcgccgctgacg
atctgggccattcccatcgtcgacgctgcgacgagcgccaacgacttcgatctgcgtgat
gtgcgcaaacgccgcatgtcggtctatatcggcatcacgcccgaccacctgtcggaggct
gcgctgctcgtaaatctcgtgttttcgcaactcgtcaatctcaatacgaagcagttgccc
gagtctgatccaacgctgaaattccagtgcttggtcctgctcgacgaaatgacggcgatc
gggaaaatccacatcattgcgcgggcggttgcctacatgtcgggctataacctgcgcctg
ctgtctatcgtccagtcgatcgcgcaactcgaatctgtctacggccgggccgatgcacgc
accttcgtcaccaatcacgcgatgcagattctctacgcgccgcgtgagcagaaggatgcg
aacgactattccgagatgctcggcacgtttaccgatcagtcacgcagcgtcagccgctcg
aacgcgatcttcggtggtcgcggtggatcgagcgaaagcgtgtccgagcagcgccggcca
ctcctgctgccgcaggaactgaaggaactggggcgcgaaaaggaaatcatcgtgctcgaa
aacaccaagccgatcctggccgacaagatctgctactggcgcgatcccgagtttgtctcg
cgcgtgatggcggcaccctcggtgccaaccatgaatctggcgcgcttcagcatcgtggtc
gaacgacggctgcgcgagctgcggacagacgagatcgattcggaaggcaccgggctcatc
aatccagcggccgagtatctggaagtgttgcaggcatgggatcctcgcgatctcccgccg
agcctcgatgacatcagtgaagacgatgccgtggcgtatgtggagcggcattttatgctg
cttggtgtgcccgaggaaagggtccggaaggcgacccgccgcctgtcggttgccgatctc
gatgcggcggagctttcctcaattgaaccatcacgaccctgccggacgtctgcgcggcgg
gtaccctcaaatgttgtgccgatccagggaggcgggcgatga

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