Paraburkholderia caffeinilytica: DSC91_007554
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Entry
DSC91_007554 CDS
T06448
Name
(GenBank) ACR/RND family transmembrane transporter
KO
K18138
multidrug efflux pump
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf01501
beta-Lactam resistance
pcaf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSC91_007554
01503 Cationic antimicrobial peptide (CAMP) resistance
DSC91_007554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_007554
01504 Antimicrobial resistance genes [BR:
pcaf01504
]
DSC91_007554
Transporters [BR:
pcaf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DSC91_007554
Antimicrobial resistance genes [BR:
pcaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DSC91_007554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
SecD_SecF_C
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
AXL53894
UniProt:
A0ABQ1NDJ5
LinkDB
All DBs
Position
2:4481810..4484914
Genome browser
AA seq
1034 aa
AA seq
DB search
MNVSSWSIRNPVPAVLCFILLTVFGLLGFHRLQVQDFPEMDLPAITISASLEGAAPSQLE
NEVARKIEDKLTSLSLLDHISTTITDGAVSISVIFKLEKDPQAALSEVRNAVDSARAELP
AEMAAPTVSKVDSAGSPLVTYTAASASMDEQDLSWFVDNDLSKALLSVKGVSKVERIGGI
DREVLIDLNPATLAGLGLTAETVSNQLKAMQRDRSGGQGDIGGQRQSARTLIGVGAVQDV
ATLTIATGDGRHVRLDQIARVHDGAADRTSYAYLNGKPVVGVQITRSKGNSDVTVMHDLN
RTVAAFAAAHPKVQLTEASNTVTPIEDNYEGSMSMLIEGALLAIAVVWWFLRDGRATLVS
AAALPLSITPTFGFMYLAGYTLNTVTLLALSLVIGILVDDAIVEIENIERHLRMGKSPFQ
AAMEAADEIGLAVIATTFTLVAVFLPTAFMAGIPGLIFRQFGVTASVAVLISLLVARLLT
PMMAAYLMKAASHVDQDGPLMKRYLGWVHACLGKRGRTMAAVGLFLLVSFAAIGALKTGF
LPSQDKSQTQVKLELAPGSTLEASRATALHANTLISRLPEVSGVFASVGSANDSSGGPVG
GGSSTSDVRTSSLIVDLVPRSKRGLKQSAVEDEIRAQLRDLPGVRVSVNNGGNGEKLQIT
LAGSDTASLEASATELEKQLRTLHGIGNVTSSAALQRPEVQFRIDPARAADLGVTAQAAA
DAVRIGTYGDYSTSLPKLNLPDRQVALRVRLNPALRQDLDVIGQLRVAGTHGSVTLASLG
TLSIGSGPSQIDRMDRDRNITLSVELNGRTLGEVNQEAHQLPALRNLPASVREVQQGEVQ
HMDELFNSFGLAMAIGIFCVYAVLVLLFHDFLQPATILCALPLSIGGALFSLLVARMSFS
MPALIGLLMLMGIVTKNSILLVEYAVVARHERGLSRMEALMDACHKRARPILMTTIAMGA
GMLPNALGLGADPSFRQPMAIVVIGGLLASTLLSLIVIPVIFTYVDDLEQWLRRRFRHAA
GVRETALAKDTAAS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcctcgtggtcgatccgcaatcccgttcccgcggtgctgtgcttcatcctg
ctgaccgtcttcggcctgctcggttttcacaggcttcaagtgcaggatttcccggaaatg
gacctgccggccattaccatttccgcttcgctggaaggcgcggcgccgtcgcagctggaa
aacgaggtggcccgcaagatcgaggacaagctgacttcgctgtcgctgctcgatcacatc
tccacgacgatcaccgacggcgcggtcagcatcagtgtcatcttcaagctggagaaagac
ccgcaggccgcattgagcgaagtgcgcaacgcggtggacagcgcgcgcgccgaactgccc
gcggagatggcggccccgaccgtgtctaaagtcgactcggccggctccccgctcgttacc
tacacggccgcttccgcgtcgatggacgagcaggacctgtcctggttcgtcgacaacgac
ctttccaaggcgctgctctcggtcaagggcgtctccaaggtcgagcggatcggcggcatc
gaccgcgaagtgctgatcgaccttaacccggcaacgttggccgggctcggcctgacggcg
gaaacggtctcgaaccagctcaaggccatgcagcgcgaccgctccggcggacagggcgac
atcggcggccagcggcagtcggcgcgcacgctgattggcgtgggcgccgtgcaggacgtg
gcgaccttgacgatcgccaccggagacggccggcacgtgcgcctcgaccagatcgcccgc
gtccatgacggcgccgcggaccgtacgagctatgcctatctgaacggcaagcccgtcgtc
ggcgtgcagatcacgcgctcgaagggcaattcggatgtgacggtcatgcacgatctgaac
cgcaccgtggccgcgttcgccgccgcgcatccgaaggtgcagttgaccgaagcgagcaac
accgtcacgcccatcgaagacaactacgagggctcgatgagcatgctgatcgagggagcg
ctgctcgccatcgccgtggtctggtggttcctgcgggacggccgggccacgctggtgtcg
gcggcggcgctgccgctgtcgatcaccccgacgttcggcttcatgtacctcgccgggtac
acgctgaacaccgtgacgctgctggccctgtcgctcgtgatcggcattctcgtcgacgat
gcgatcgtcgagatcgagaacatcgagcgccatctgcgcatgggcaagtccccatttcaa
gccgccatggaagcagccgacgagatcggccttgcggtgatcgccaccaccttcacgctg
gtggcggtgtttctgccgacagcgttcatggcgggcattccagggctcatcttccggcag
ttcggggtgaccgcgtcggtggccgtgctgatctcgctgctggtcgcgcgtctgctcacg
ccgatgatggccgcctacctgatgaaggcggccagccacgtcgaccaggacggcccgctg
atgaagcgctatctgggctgggtgcacgcctgcctcggcaagcgtggccgcaccatggcg
gcagtcggcctgttcctgctggtctcttttgcggcgatcggcgcgctgaagacgggcttc
ctgccgtcgcaggacaagtcgcagacgcaggtcaagctcgaactggcgccgggcagcacg
ctcgaagcgagccgcgccacggcccttcacgcaaacacgctgatcagccggttgcccgag
gtaagcggcgtgttcgcctcggtcggaagtgcgaatgacagcagcggcggtccggtcggc
ggcggcagtagcacgtcagatgtgcgcacttcgtcgctgatcgtcgacctggtcccgcgc
agcaagcgcggcctgaagcaatcggcggtggaagacgagattcgcgcgcagttgcgcgac
ctgccgggcgtgcgcgtatcggtgaacaacggcggcaacggtgagaagctgcaaatcacg
ctggccggcagcgatacggcttcactcgaagcttcggccaccgaactggaaaagcagctg
cgcacgctgcacggcatcggcaacgtgacgtcgagcgcggcgctgcaacgccccgaagtg
cagttccggatcgacccggcgcgcgccgccgacctcggcgtgacggcccaggccgcggcc
gacgccgtgcgcatcggcacctacggtgactactcgacgtcgctgcccaagctcaatctt
ccggatcggcaggtcgccctgcgcgtccgtctcaatccggcgttgcggcaggacctcgac
gtcatcggccagttgcgtgtggcaggcacgcacggcagcgtgacgctggcctcgctgggc
accctttcgatcggcagcggcccgtcgcagatcgaccggatggaccgcgaccgcaacatc
acgttgtcggtcgagctcaacggacgcacgctcggcgaagtcaaccaggaagcgcaccag
ctgccggcgctgcggaatctgcccgccagcgtgcgcgaggtgcagcaaggcgaggtgcag
cacatggacgagctgttcaacagcttcggcctcgcgatggcgatcggcatcttctgcgtg
tacgcggtgctcgtgctcctgttccatgatttcctgcagccggccacgatcctctgtgcg
ctgccgctgtcgattggcggggctctgttttcgctgctggtcgcccgcatgagcttttcg
atgcccgcgctgatcggcctgctgatgctgatgggcatcgtgaccaagaattcgatcctg
ctcgtcgagtatgcagtcgttgcccggcacgaacgcggcttgagccggatggaagcgttg
atggacgcctgccacaagcgggctcgcccgatcctgatgacaaccatcgccatgggtgcc
ggcatgctgcccaacgccctcggcctcggcgcggacccgagcttccgccagccgatggcg
atcgtcgtgatcggcggcctgctcgcctccacgttgctgagcctgatcgtgattccggtg
atcttcacctacgtggacgacctggaacagtggctgcgccgccggttcaggcacgccgca
ggggtacgggaaaccgccttggcgaaggatacggccgcgtcatga
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