Porphyromonas cangingivalis: NCTC12856_01633
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Entry
NCTC12856_01633 CDS
T06514
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12856_01633 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcag03400
]
NCTC12856_01633 (nth)
Enzymes [BR:
pcag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC12856_01633 (nth)
DNA repair and recombination proteins [BR:
pcag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC12856_01633 (nth)
Prokaryotic type
NCTC12856_01633 (nth)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF763
DUF2400
Motif
Other DBs
NCBI-ProteinID:
VEJ04306
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All DBs
Position
1:complement(1880311..1880982)
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AA seq
223 aa
AA seq
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MPRHQVKRQERYDGIIAYFKEAMPTAETELVYTNPFELLVAVILSAQCTDKRVNMITPAL
FEAFPTAEVMAAASPELLFEYIRSVSYPNNKSKHLASMAKMLVEDFGSVVPDTIDELVKL
PGVGRKTANVVASVIYDVPAMPVDTHVYRVSHRIGLVPSTANTPLKVERMLERHIPRDLL
SRAHHWLILHGRYVCIARSPKCMTCGIRDYCRHGEKKTALDKG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgccccgacatcaagtgaagcgtcaggagagatacgatgggatcatcgcttacttcaag
gaggcgatgccgacagcagagacagagttggtgtacaccaacccttttgagcttctcgtg
gctgtcatcttgtccgcacagtgcacggacaagcgtgtcaacatgatcacaccggcactc
ttcgaggccttccccacggcggaggtgatggctgcggcttcgcccgaactgctcttcgag
tatatccgaagtgtatcatacccaaacaacaagtcgaagcatctggcttcgatggcaaag
atgctggtcgaggattttggttcggtcgtccctgataccatcgatgagctggtcaaactc
cccggtgtggggcgcaagacggcaaatgtcgtggcttcggtcatctatgacgtgcccgcc
atgcctgtggatactcatgtgtacagagtgtcgcaccgtatagggttggtgccttcgacg
gccaacacccctctgaaggtggagcgtatgctcgaacgccacatccctcgcgacctcctc
tctcgtgcgcaccactggctgatccttcacggcagatatgtctgcatcgctcgcagtccc
aaatgtatgacgtgcggcatccgtgattactgtcgtcacggagaaaagaagactgctctg
gataagggatga
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