Pasteurella canis: K7G93_000123
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Entry
K7G93_000123 CDS
T07908
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pcai
Pasteurella canis
Brite
KEGG Orthology (KO) [BR:
pcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcai03009
]
K7G93_000123 (rlmC)
Enzymes [BR:
pcai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
K7G93_000123 (rlmC)
Ribosome biogenesis [BR:
pcai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K7G93_000123 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_12
Methyltransf_25
MTS
UPF0020
Methyltransf_32
Methyltransf_4
Methyltransf_11
Methyltransf_15
PALP
Motif
Other DBs
NCBI-ProteinID:
UEC23415
LinkDB
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Position
complement(137988..139148)
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AA seq
386 aa
AA seq
DB search
MSLTLPCQHYEQNHCRSCQWLELPYSAQLERKTQHLKQQLTHLDCSQTTWIAPYQSPLST
FRNKAKMAVSGTVERPILSLPQNNVDLTDCPLYPTHFVAIFHILKDFIARAGLVPYNITK
QKGELKYILLTESQLDGGLMLRFVLRSETKLALIQREFAGLLKKLPQLKVVSLNIQPQHA
AILEGEKEIFLTEQQTLEESFNLIPLFIRPQGFFQTNPSVASGLYATAQNWIKNLPIEKL
WDLFCGVGGFGLHCAKALKQANPTKKIELIGIEISPSAIKAAMLSARQLGLEHVRFQPLD
ATKFALEQYQTPDLVIVNPPRRGIGNKLAQFLNQLAPHFILYSSCNAETMGKDLGDLTHY
QLEKIQLFDMFPHSHHYEVLCLLKKK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaacactcccttgccaacattatgaacaaaatcattgccgttcgtgccaatgg
ctagaactcccttattctgcccagcttgaacgtaagacacagcatttaaaacaacaatta
actcatttagattgctcacaaacaacatggattgctccttatcaatcgcctttaagtacg
tttcgtaataaggctaaaatggcagtgagtggtacagtcgaacgcccaattctgagcctc
cctcaaaacaatgtggatctaacagattgtccactttacccaacacacttcgttgctatt
tttcacattttaaaagacttcattgctcgtgcaggcttagtgccctacaacattacaaaa
caaaaaggtgaacttaagtatattttacttacggaaagtcagcttgatggtggtttaatg
ctacgcttcgtattacgttcagaaacaaaactagcgttaattcaacgtgaatttgcaggt
ttgttaaaaaaattaccacaactaaaagtagtcagcctaaatattcagccacagcatgcc
gctattttagaaggtgagaaagaaatttttcttactgaacaacaaacattggaggagtct
tttaatctaatcccccttttcatccgtccacaaggtttttttcaaactaacccctctgtt
gcctcaggtttatatgcaacagcacaaaattggataaaaaacctaccgattgaaaagctt
tgggatcttttttgtggtgtaggtggttttggcttacattgtgcaaaagcattaaaacaa
gctaatccaactaaaaaaattgaattaatcgggattgaaatttccccctcagcgattaag
gctgcaatgctctctgctcgtcaattaggtttagagcatgtacgctttcaacccctagat
gcaacaaaatttgctctagaacagtatcaaacaccagatttagtgattgttaatccacct
cgacgtggtattggtaacaaactagctcaatttcttaatcaattagcgcctcattttatt
ttatattcaagttgtaatgcagaaactatggggaaggatttaggagatttaacccactat
caactcgaaaagattcaactctttgatatgtttccacattcccatcattatgaagtactg
tgtttattaaaaaagaaataa
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