Pomacea canaliculata (golden apple snail): 112563875
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Entry
112563875 CDS
T05881
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112563875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112563875
Spliceosome [BR:
pcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112563875
Complex C
U5 SnRNP specific factors
112563875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
PDEase_I
Motif
Other DBs
NCBI-GeneID:
112563875
NCBI-ProteinID:
XP_025094078
LinkDB
All DBs
Position
LG5:32854092..32876522
Genome browser
AA seq
975 aa
AA seq
DB search
MDQELYDEFGNYIGPELDSDDDNFDDDDNQEEDAEYVERDDDEADMDQDDTDDVGDMQVV
LHEDKKYYPTAEEVYGPDVETIVQEEDTQPLTEPIITPIQKKKFSMAEQDLPDTSYDMEF
LADLMDTPELIRNVAICGHLHHGKTSFVDCLIEQTHPEIEGGYDRDMRYTDILFTEQERG
VSIKSTPVTLVLPDTKNKSFLINIFDTPGHVNFSDEVTAAYRLSDGVVVFVDAAEGVMLN
TERLIKHALQERLALTLCINKIDRLILELKLPPADAYFKLRHIIDEVNAIISMYAEDETS
QTVSPVLGNVCFASSYYRFCFTLKSFAHIYADSFGGINEKKFAERLWGDVYFNSKTRKFS
KKPSHSTSQRSFVEFILEPLYKIFAQVVGDVDECLPRVCDELGVHLTKEEQKLNIRPLLR
LVCRRFFGDFTGFVDMCVEHISSPVSNARSKVEHAYTGPLTSELAEEMCLCSADGPLVIH
TTKLYPTQDGTSFHVFGRVMNGTLHSNQEVRILGENYTLQDEEDSRFGQVGRLWISEARY
KVEVNRVSAGNWILMEGIDQPVVKTSTITDMTPHEEVYIFRPLKFNTGSVMKIAVEPVNP
SELPKMLDGLRKVNKSYPLLTTKVEESGEHIVLGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVSFCETVVETSSLKCFAETPNKKNKLTMIAEPLEKGLAEDIENEVVQISWPRKKLGEF
FQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKNLLSAVKDSIVQGFQWATREG
PLCDEPIRNVKFKILDATIAGEPIHRGGGQIIPTARRVAYSAFLMATPRMMEPYCFVEVM
APADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFLPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELAKQDVLLNYPM
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagagctgtatgatgaatttggcaactacattggtccagaactcgacagtgat
gatgataactttgatgatgatgataatcaagaagaagatgctgaatatgtggagagagat
gatgatgaggctgacatggatcaggacgatacagatgatgtaggagacatgcaagtggtg
ctccatgaggacaaaaagtattaccctactgctgaggaagtctatggccctgacgttgag
acaattgtacaagaagaagacacacaacctttgacagaacctattattaccccaatacag
aagaaaaaattctccatggctgagcaggatttgccagacaccagctatgatatggaattt
ctagcagatcttatggatactccagagcttatcaggaatgtagcaatttgtggacatctg
caccacggaaagacttcctttgttgattgcctcatagaacagactcatccagaaattgaa
ggaggttatgacagggatatgcgatacacagacattttgtttactgagcaagagagaggg
gtcagcatcaaatctacacctgtcaccttggtgttgcctgacactaaaaacaaatctttc
ttgatcaacatctttgacactcctgggcatgttaatttctctgatgaagtcactgctgcc
tatcgtttgagcgatggtgttgttgtctttgtggatgcagcagaaggggtaatgctgaac
actgagcgactgatcaaacatgccctccaagaacgtctcgcacttacactttgtatcaat
aaaatagatcgtctcatcctggaactgaagctgcccccagctgatgcctactttaagctt
cgccatatcattgatgaagtcaatgccatcattagcatgtatgcagaggatgaaacatca
cagacggtttcccctgtcctgggcaatgtgtgttttgccagctcctactatcgcttctgc
ttcaccctcaaatcctttgcacacatttatgctgactcttttggtggcatcaatgagaaa
aagtttgctgagcgtttgtggggagatgtctacttcaacagtaagacgcgaaaattcagc
aagaaaccatcccatagtacctcccagagatcatttgttgagttcattcttgagccacta
tacaaaatttttgcacaagttgttggtgatgtggatgaatgcttacctcgtgtatgtgat
gaactgggggtccacttgaccaaggaggaacaaaagctcaacatccggcctttgctgcgt
cttgtttgtcgacgtttttttggagactttactgggtttgtggacatgtgcgtggagcat
atatcatcacctgtatctaatgctcgctcaaaggttgaacatgcctatactggacctttg
acctcagaactagctgaggagatgtgcctttgttcagcagatggtccactggtcattcac
acaaccaagctttatccaacacaggatggtactagtttccatgtctttggacgtgttatg
aatgggacattgcattccaatcaagaagttcgaatattgggtgaaaattatacactgcag
gatgaagaggactctcgctttggacaggttggacggctgtggatttctgaagccaggtat
aaggtggaggtgaaccgagtgtcagctggcaactggatactgatggaaggcattgaccag
ccagtggtcaaaacatccaccatcacagacatgacaccacacgaagaggtttacatcttt
cgaccactcaaattcaacacaggctcagtgatgaagattgcagtggaaccagtcaatcca
tcggagctacctaaaatgttagatggcctgagaaaggtcaacaagagttatcctttgctg
accacaaaggtggaggagtcaggtgagcacatagtgctcggcacgggggagctttatctg
gactgtgtgatgcacgacttgcgcaagatgtactcagaaatagacatcaaagttgctgat
ccagtggtgtcattttgcgagactgttgtggagacatcctctttaaaatgctttgctgaa
acacccaacaaaaagaacaagctgaccatgatcgcagagcctctagagaagggcctggca
gaagatattgagaatgaagttgtacaaatctcatggcccagaaaaaagcttggagaattt
ttccagactaaatatgactgggatctgctggctgcccgatcaatctgggcctttggtcct
gatgctacaggacctaatattctagtagacgatactttgccttcagaggtggacaaaaat
ttgctgagtgctgtgaaagacagcatagttcaaggtttccagtgggccacaagagaaggt
cccctctgtgatgaaccaattcgcaatgtcaagttcaagattcttgatgctacaattgct
ggtgagcccattcatcgtggtggtggtcagatcatcccaacagcccgccgagtggcatat
tcagcttttcttatggctactcctcgcatgatggagccctactgttttgtagaagttatg
gcccctgctgactgtgtttctgctgtttacactgtcttagccaaaagaaggggtcatgtg
acgcaggatgccccagtgcctggatcacctctttacaccatcaaggcattcttacctgct
atcgactcttttgggtttgagactgacttgcgcactcacacccagggccaggccttctgc
ttgtctgtcttccatcactggcagattgtacctggtgatcccctagacaagagcattgtc
atccgtcctctagagccacagccagccactcacttagcccgcgagttcatgatcaagact
cggcgtcgcaagggattgagtgaggatgtcagcatcaacaagttttttgatgaccctatg
ttgctggagctggccaagcaagatgtcttactcaactatccaatgtag
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