Pomacea canaliculata (golden apple snail): 112564521
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Entry
112564521 CDS
T05881
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112564521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcan04131
]
112564521
Membrane trafficking [BR:
pcan04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112564521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
112564521
NCBI-ProteinID:
XP_025095167
LinkDB
All DBs
Position
LG5:26751625..26798366
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AA seq
1053 aa
AA seq
DB search
MQSGSDSGDKAAGKRSVVPLPVSAGLSSSSNMVVSWHARLDKRPSERTAEDLDVIHSKLK
ELKVLEKFHPFLLQQLCYYGFYECLEKGITLFRQGDVGTNWYTVLTGSLAVLTSDSTRPK
VHQDGVMLCIVGPGTSFGEGILTGKPHSVTVVTKDTTELLRVELKDFKVLWEVSRNIASS
PLTVLSSRNKQQMESAVTPLSALPCLSEDMRKLNCNQFVEPGDTIPNPAAPITTFPSEKV
AHAAHVLRTVLMTSAPYMIRDRKFHLRTYRRCMVGSEMTDWLLSQNTLVQTRQQGVGMWQ
VLLEEGVLVHVCHEHQFKDKYLFYRFTTDDQGTGVTPSAADRKACEEQLQDTLLMLAKIG
PDAMMRMILRKPGADRTFEEIEIIYEELLHISALSHLSCMVKRELASVIVFESHPKAGTV
LFNQGDEGKSWYIILKGSVNVVIYGKGIVSTLQEGDDFGKLALVNDAPRAATIVLKEDNC
HFLRVDKDDFNRILRDVEANTVRLKEHGQDVLLLEKIPVTVPTTGGSFHSQYKYSVMAGT
PEKMFEYLLETLIDNKSEDSMDTFLQDFLLTYVIFMSDESLCQAINNHYHAKSNQSSDQE
AVDFILSHKKGVVQFVLEWYNVAGDAFLENPAITKFLKDLIQSLEEDMQIYPLLSMEHEL
LTNLTSYSKSTTSTGRPTKKKATHSLIISRKSSLKSQQGSEKKRPIKAKDENIFKVYCAD
HTYSTLRLPMDSTVKEIIIAARDKLCLGDDPVLCEVKSTGERIVFRDEDICITTSLSLNG
RLFITPPEHLDALTPLPEQEGPSTGTSNTLEMMSTKELAYHMTCYDWELFSCIHEYELIY
HVFGPSKFGRITANLDLFLRRFNEVQFWVVTEMLLVTNVSKRVQLLRKLIKLASHCKDFQ
NLHSFFAIVMGLSNIAVSRLSQTWEKLPGKLKKLFEEFETIMDPSRNHRVYRLTVAKMAP
PIIPFMPLLMKDMTFTHDGNKTYFDNLVNFEKMHMIAQTLRTVGYCRSQPLQLDLPNTVK
ASADTKSYIRNLQVIDNQRVLTQLSHKLEPKKS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaggtagcgacagcggcgacaaggcggcggggaagaggagtgtggttcccctt
cctgtgagtgctgggctcagcagcagcagcaacatggttgtcagttggcacgccaggctt
gataaaaggccgagtgaacgaacagcagaagatcttgatgtgatccacagcaaactaaag
gagctcaaagtcctggagaagttccacccattcctgcttcagcagctctgctattatgga
ttttatgaatgcctagaaaaaggcattacattgtttcgacaaggagacgtggggaccaac
tggtacacggtgctcaccggatccctggctgtgcttacatcggattcgacaaggccaaaa
gtgcatcaggatggagtgatgctgtgcattgttggtccgggtacatcgtttggcgagggg
attttgaccggaaaaccgcacagcgttacagtagtaaccaaggataccaccgagctgctg
cgcgtggaactgaaggacttcaaagttctgtgggaagtaagccgcaacattgcatcttct
cctctaactgtattgagcagtcgaaacaagcagcagatggagagtgctgtcaccccacta
agtgccttaccatgcctgtctgaagacatgcgaaagctcaactgtaaccagttcgtcgag
ccaggagacaccatccccaaccctgccgcccccatcaccacgttcccatcagagaaagta
gctcacgcggcgcacgtgctgcgcactgtgttgatgacgagcgccccctacatgatcagg
gaccgcaagtttcacctgcggacctaccgtcgctgcatggtgggctcggagatgaccgac
tggctgctgtcgcagaacaccctagtccagacacggcagcaaggggtgggcatgtggcag
gttctgctggaggagggcgtgttggttcacgtgtgtcacgagcaccagttcaaggacaag
tatctgttctatcggttcaccactgacgaccaggggacgggggtgacgccctctgctgca
gaccgcaaggcgtgtgaggagcagctgcaggacacactcctgatgctggccaagatcggc
cctgacgccatgatgcggatgatcctccgcaagccgggggcagaccggacctttgaagaa
attgagatcatctatgaggagctgctgcacatctctgccctttcccacctgtcgtgcatg
gtcaaacgggagctggcctcggtcattgtcttcgaatcccatcccaaagcaggaactgtg
ctgttcaaccagggggacgaagggaagtcctggtatattattcttaaaggttcagtcaac
gtcgtcatttatggaaagggtattgtgagtacactgcaagaaggtgatgactttggcaaa
ttagcacttgtaaatgatgctccaagggcagccaccattgtcctcaaagaggataattgt
cactttctgcgtgtggataaagatgacttcaacagaattcttcgagatgttgaggccaac
actgtgcggctcaaggagcatggtcaggatgtcttgctgctggagaagattccggtgact
gtgcccacgactggtggttcctttcattcacagtacaagtactctgtaatggcaggcaca
ccagaaaagatgtttgaataccttctggagacccttatcgacaacaaaagtgaggacagc
atggatacatttcttcaagactttttgctgacatatgtcattttcatgagtgatgaatcg
ttgtgtcaagccatcaacaaccactatcatgctaagtccaatcagagcagtgaccaagag
gcagttgactttatattgtctcacaagaagggtgtagtgcaatttgtgctagagtggtac
aatgttgctggagatgctttcttggagaatcctgcaattaccaagtttttgaaggacttg
attcagtcgctagaggaggacatgcagatctatcccctcttgtctatggaacatgaactg
ctcaccaatcttacaagttatagtaaaagcactacctccacaggtcgtccaactaaaaag
aaggcaacacattccttgatcataagccgaaagtcgtctctaaaatcccagcaaggctct
gagaagaagagaccaatcaaagctaaagatgaaaatatattcaaggtgtactgtgctgat
cacacatacagcaccctgcgtcttcctatggattccacagtgaaggagataattattgca
gctcgggataagctgtgtctaggagatgaccctgtcttgtgtgaggtcaagtccacagga
gagaggattgttttcagagatgaagatatttgcatcactacgagtcttagcttgaatggg
agacttttcatcacgccccctgagcacttagatgctttgactcccttgccagagcaagag
ggacccagcactggaactagcaacactttagaaatgatgtcaacaaaagagcttgcctat
cacatgacctgctatgactgggagttattctcatgcatacatgagtacgaattaatctat
catgtgtttggcccatcaaaatttggccgcatcactgccaacctggacttgtttttacgt
cgcttcaatgaagtacagttctgggttgtcacagaaatgctactggttacaaatgtcagc
aagagggtacagctgcttcgcaaactcatcaagctggcctcacattgtaaagacttccag
aatcttcattcatttttcgccattgtgatgggactaagcaacattgctgtcagtaggctg
tctcagacctgggagaaacttcctggaaagttaaagaagctgtttgaggaatttgagacc
attatggacccttcacgcaatcatcgagtgtaccgcttgactgtcgccaaaatggctcct
cccatcattccattcatgccgcttctcatgaaagatatgacattcactcatgatggaaat
aaaacatactttgataacctagtgaactttgaaaaaatgcatatgattgcacagacccta
agaactgttgggtactgtcgaagccaaccactgcaactagacctgcctaacacggtgaag
gcttcagcagatacaaagagttacattcgcaacttgcaggtgattgacaaccaaagggtg
ttgacacagttatctcataaactggagccaaaaaagtcatag
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integrated database retrieval system
