Pomacea canaliculata (golden apple snail): 112572194
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Entry
112572194 CDS
T05881
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112572194
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcan01007
]
112572194
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcan03016
]
112572194
Enzymes [BR:
pcan01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
112572194
Amino acid related enzymes [BR:
pcan01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112572194
Transfer RNA biogenesis [BR:
pcan03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112572194
Prokaryotic type
Other AARSs
112572194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
Ubiquitin_IARS1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
112572194
NCBI-ProteinID:
XP_025107548
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All DBs
Position
LG9:complement(19011636..19028544)
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AA seq
1283 aa
AA seq
DB search
MAQPVPESVSFPEEEDKIYEFWKSIDAFRTSLKLSKGRPRYSFYDGPPFATGLPHYGHIL
AGTIKDVVTRWAHMSGFHVERRFGWDCHGLPVEHEIDKTLGIKGPDDVMKMGVKAYNDEC
RKIVSRYCGDWKEIISRLGRWIDFDNDYKSMYPWYMESIWWVFKQLYNKGLVYKGYKVMP
FSTACNTPLSNFESGQDYRDVVDPAVIVSFPLEEDPNVKFVAWTTTPWTLPSNLALCVHP
ELDYVKVRDKQNNEVYIMMEARLEALFRSEDEYQVLEKFKGKMIEGKKYKPLFDYFAHMR
EKTGAFRVLTGTYVTTDVGTGIVHQSPFFGEDDYMVCLANGVIRKDGDVVCPVDASGCFT
EEVTDFKGMYVKEADKHIIKLLKARGRLVHEGTCKHSYPFCWRSETPLIYKAVPSWFIRV
EQAQEILLQTNSKTYWVPDFVKEKRFGNWLREARDWAVSRNRYWGTPVPIWVSEDGEEVV
CVGSIEELKQLTGQEVTDLHRENVDNLTIPSAQGKGVLRRVTEVFDCWFESGSMPYAQAH
YPFENKKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTLLFGKPPFRNLVANGLVLASDGQ
KMSKRKKNYPDPMEVAYKYGADALRMYLINSPAVRAENLRFKEEGVRDVVKDVFLPWYNA
YRFLMQNIERLEREEGHKFVFSELTSEVSTNYMDRWILSFTQSLIKYVTSEMAAYRLFTV
MPRLVKFVDQLTNWYVRMNRRRLKGDSGVADCYKALETLFSVLFSMTRVMASFVPFITEL
MYQNMRHLLADDGGSGEETRSVHYLLLPKAQENLIFTEIETAVSRMQTVIELGRVIRDRK
TLPLKYPLKEVVAICNDNTVLDDIRSLEKYILEELNIRSLTVTSDKQKYGVQLRAEPDHK
VLGAKLKGALKAVSEQIRQLTDEQLTAFLQTGTISVGGYTLGSEDLRVMFTSTTAQSGNG
DSSQYEAHSDGQVFLFYLVLLDVTPDQSMVDEGVAREVINRIQRLRKKAKLTPSDDIVVY
YQASSELDAVVKQFSEYITSTTKQPLQPYPVKRGESVIISESLPIKNHSLEMTITQTGNI
TAASQAVNFAQTASSLSPAPVVSGVQPCVKFVNVQLCGKIAAGEGRTGTSGTLLLENPAG
QNLLSEDKVLQQIQSVFGLRGRKIRAFEDAKLSKELSGQMLQSGCSLYVTPVTGSASLVP
DISPASPVCCFANVEFGGKKATVLLENPRGCTTSPRELLDQVRAVYSLNGKPVRLSLSKT
KGDILDLQLLDLLSLHSKQLYIV
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagccagtgccagagtctgtcagctttccagaggaggaagacaaaatctatgaa
ttttggaagagcatagatgcctttaggacttcacttaagctgtcaaagggaagaccaagg
tactctttttatgatggcccaccctttgctactggtttgcctcattatggacacattttg
gctggaaccatcaaagacgtggtgactcgatgggcacacatgagtggttttcatgtagaa
aggcgctttggctgggactgtcatggtttacctgtggagcatgaaattgacaagactctg
ggcatcaaagggcctgatgatgtcatgaaaatgggagtgaaagcatacaatgatgagtgc
cgcaaaattgtttccagatactgtggtgactggaaagaaataatttcccgacttggccga
tggatagattttgacaatgactacaagtccatgtatccatggtacatggaatccatctgg
tgggtctttaaacagttgtataacaaaggactggtctacaaaggttacaaggtgatgcca
ttttccacagcctgtaacacaccattgtccaattttgaatctggtcaagattacagagat
gttgtggatcctgctgtcattgtaagttttccactggaagaagatccaaatgtgaagttt
gttgcttggacaacaaccccatggacattaccttcaaatcttgcattgtgtgtgcatcct
gaacttgattacgtcaaagtcagagacaagcaaaacaatgaagtctacattatgatggaa
gccagactggaagctcttttcagatctgaggatgagtaccaggtcctggagaagtttaaa
ggcaagatgattgagggcaagaaatacaaacctttgtttgattattttgcacatatgcga
gagaagactggggctttccgtgtcttgactggcacttatgtcactacagatgttggcaca
ggcattgttcaccagtcaccgttctttggcgaggatgattacatggtgtgtttggcaaat
ggcgtcatccgtaaggatggagatgttgtttgccctgtggatgccagtggatgctttaca
gaagaggtcacagactttaaagggatgtatgttaaggaggctgacaagcatatcatcaag
ctcctgaaggccaggggccgactggtacatgagggaacatgcaagcacagctacccattc
tgttggagatcagagactcctctcatctacaaggctgtgccaagttggttcattcgtgtg
gaacaagcccaggagatccttctgcagaccaattcaaaaacatattgggttcctgacttt
gtaaaggaaaagcgctttggtaactggcttcgagaggctcgagactgggcagtatccaga
aatcgatactggggtacaccggtacccatatgggtcagcgaggatggagaagaggttgta
tgtgttgggtccatagaggagctgaagcagttgacgggtcaagaggtgacagatctgcac
agagagaatgtggataatttgaccataccatcagcccagggcaagggagttttgcgaagg
gtgacagaagtgtttgactgctggtttgagtctggcagcatgccttatgcacaggcacac
tatccttttgaaaacaagaaggaatttgaggacacatttcctgcggacttcattgcagag
ggtattgaccagacccgtggatggttttacacacttctggtgctctcaactttgctgttt
ggcaaacctcccttcagaaatcttgttgccaatggacttgttcttgcttccgatggacag
aagatgagcaaacgcaagaaaaactacccagaccctatggaggttgcttacaagtatggt
gcagatgctctgaggatgtacctgatcaactcaccagctgttcgtgctgagaacttgaga
ttcaaagaagaaggagttcgtgatgtggtgaaggatgtatttcttccctggtacaatgca
taccgatttctcatgcaaaacattgaacgacttgaacgagaagaaggacacaagtttgtt
ttctctgaactgacatcagaagtgtccacaaactacatggaccggtggattctgtcattc
acacagtctctcatcaagtatgtgaccagtgagatggcagcatatcgtctcttcacggtg
atgccacgattggttaaatttgttgaccagctgaccaactggtatgtccgcatgaatcgt
cgccgtctaaagggtgacagtggagttgctgattgctacaaagcactagaaacattattc
agcgtcctgttctctatgacaagagttatggcttcgtttgttccattcatcacagaattg
atgtatcagaacatgcgtcacttgctggctgatgatggtggctcgggggaggaaactcgc
agtgtgcattatctgctgttgccaaaagcacaggaaaacctcatttttactgaaattgag
actgctgtctcgcgcatgcagacagttattgagctgggacgtgtcatccgtgataggaaa
accctccctctgaagtatcctctgaaagaagttgttgccatctgtaatgacaacacagtt
ttggatgacatccgctcactggagaaatacatacttgaggaactgaatatacggtccctg
actgtgacatcagataaacaaaagtatggggtgcaacttcgagctgagcctgaccacaag
gttctgggtgctaaactgaagggagccttgaaggcagtgtctgaacaaatcagacaactg
actgatgaacagctaacagcatttctacagacagggaccatcagtgtgggtggctacacg
cttggatcagaggatctgcgggtcatgtttacatctaccactgctcagagtggcaacggt
gacagctcccagtatgaggctcattcagatggccaggtatttcttttttatctggtgttg
ctggacgtcacccctgatcagtccatggttgatgaaggagttgcacgagaagtcatcaac
cgtatccagcgtcttcgtaaaaaggccaaactgacaccttcagatgacattgtggtgtat
taccaggcatcgtcagaactggatgctgtagtgaagcagttctcagaatacatcacctca
acaacaaaacaaccacttcagccatatcctgtaaagcgtggagaaagtgtgataatttct
gaaagcttgccaatcaaaaatcacagccttgaaatgaccatcactcagacaggcaacatc
acagctgcttcccaggcagtaaattttgctcaaacagctagcagtctgtccccagcacct
gtggttagtggtgtgcagccatgtgtgaaatttgtcaacgtgcagctgtgtggcaaaata
gcagcaggcgaggggcgaactggaacctcaggaacgctgcttttagagaatccagctggc
cagaaccttctgtcagaagacaaagttttacaacagatccagtcagtctttggcctccgt
ggacgtaagatacgcgcatttgaagatgcaaaactaagcaaggagttgagtggtcaaatg
ttgcagtcaggctgttccttgtatgtgacacctgtcacagggtctgcttcattggtgcca
gacatttcccctgcctcacctgtttgttgttttgccaacgtggagtttggaggaaagaaa
gccacagtactgttagaaaatcctagaggatgcaccacaagtccaagagaacttttggat
caggtacgtgcagtttacagtcttaatgggaagccagtgaggctgagtttgtccaagaca
aagggcgacatcttagatctgcagttattggatcttctgtctctgcattccaagcagctc
tacattgtgtga
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integrated database retrieval system
