Phalacrocorax carbo (great cormorant): 104039353
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Entry
104039353 CDS
T08596
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04115
p53 signaling pathway
pcao04210
Apoptosis
pcao05164
Influenza A
pcao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104039353 (APAF1)
04115 p53 signaling pathway
104039353 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104039353 (APAF1)
05168 Herpes simplex virus 1 infection
104039353 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APAF1_C
WHD_APAF1
NB-ARC
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
CARD
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
EIF3I
CARD_2
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Ge1_WD40
AAA_16
AAA_22
nSTAND6
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WHD_Dark
Beta-prop_Nup120_160
WD40_RFWD3
NPHP3_N
Beta-prop_Vps41
Beta-prop_WDR75_1st
LRRC37
Beta-prop_Aladin
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
104039353
NCBI-ProteinID:
XP_009500918
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MDVKSRNYLLMNRQALEKDIKTSYIMDRMISDEVLTLQEEEKVKQQNTQKDRAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAVSSGNRKSSMDGMTSYVKTVLCEGGVP
QRPVVFVTRPKLVDAIKKKLCCLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
ILDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKMSELPEQANCLVRECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLNDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVPSQEDC
MYWYNFLAYHMAGANMQKELHDLMFSLDWIKAKTELLGPAHLIHEYVEYSSILDQKNSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKQHAQRETGAFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRVASCGADKTLQVFKAESGERLLEISAHDDEILC
CAFSADGEFVATCSADKKVKIWNSRTGQCKCVYEEHSEQVNCCQFNNRSGQYLLATCSND
TFIK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaagagtagaaattatttacttatgaatcgccaagcattggaaaaagacatc
aagacctcgtatattatggatcgtatgatttctgatgaagtactgacattacaggaggag
gagaaagtgaaacaacagaatacacagaaggaccgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactacttcatgaagggtac
agagatcttgctgcgcttcttcaggatggcatccctgctgtctcctctggtaataggaag
agttcaatggatggaatgacttcatacgttaagaccgttctctgcgaaggaggtgtacca
cagagaccggttgtgtttgtcactcgtccaaaactggtagatgctattaaaaagaaactg
tgctgcttgggaagtgatccaggctgggtcacagtgtatggaatggcaggttgtgggaag
actgttttaacagcagaagctttaagggatcatcaacttttggaagattactttccagga
ggagttcactggatttctgttggaaaacaggacaaagcagggctcctaataaaacttcag
aatctctgtagtagactagaacatgattctactctttcacaaaggccaccacttaatatt
gaggaggctaaagatcgtcttcgtttgctgatgctacgcaaatatcccagatctcttctg
attctggatgacatttgggattcctgggtattaaaagcatttgataatcaatgtcaagtt
cttatcaccagcagggacaggagtgtaacagatgctgtggccggcaataaatacgaggtt
cacgtggaaagtggactagcacatgagaagggactggagattttatccctatttgtgaat
atgaaaatgtcagaactgccagaacaagctaactgccttgtaagggaatgcaaaggttct
cctcttgtgatatccttgataggcgcattattacgagacttccctagtcgttgggaatac
tatctcaaacagctgcagaataagcagtttaaaagaatacgaaaatcgtcatcttacgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcaattgaatgacaattataaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttcta
tgtattctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaac
aaatcactgttgttctgtgatcgtaatgggaagtcattccattattatttacatgacctt
caacttgactttcttacagagaagaatcgcaaccagcttcaggagctacataaaaacata
gtaaatcagtacaagaaatattacaaacttaatacacctgttccgtctcaagaggattgc
atgtactggtataactttctggcgtatcacatggctggtgccaacatgcagaaggaactc
catgatcttatgttttctctagattggattaaagctaaaacagaattgctagggcctgct
catctgattcatgaatatgtagaatatagttcaatcctggatcaaaagaatagcacagta
cgtgagaacttccaggaatttctgtctttaaatgggcaccttcttggacggcaaccattt
cctgacattatacagctgggtctttgccagccagagacatcagaggtgtatcaacaagcc
aagcaacatgctcagagagaaacaggagcattttatttggaatggataaataaaaaatcc
ttgaaaaacctctaccgtctggtagttcgtccacacagagatgcagtttaccatgcctgc
ttttctaaggatagacaaagagtagcatcatgtggagctgataaaacacttcaggtgttc
aaagctgaaagtggtgagagactcctggagataagtgcccatgatgatgaaatactctgt
tgcgctttctctgcagatggtgaatttgtagcaacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggccagtgtaagtgtgtatatgaagaacactcggagcaggtc
aactgctgccagttcaataacagaagtggtcagtatcttttagccacctgctcaaatgac
actttcatcaaa
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