Phalacrocorax carbo (great cormorant): 104039883 Help Entry 104039883         CDS       T08596                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04115   p53 signaling pathway pcao04145   Phagosome pcao04148   Efferocytosis pcao04350   TGF-beta signaling pathway pcao04510   Focal adhesion pcao04512   ECM-receptor interaction pcao04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pcao00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     104039883 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104039883 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     104039883 (THBS1)    04148 Efferocytosis     104039883 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     104039883 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     104039883 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104039883 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pcao04131]     104039883 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pcao00536]     104039883 (THBS1) Membrane trafficking [BR:pcao04131]  Endocytosis   Phagocytosis    Opsonins     104039883 (THBS1) Glycosaminoglycan binding proteins [BR:pcao00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104039883 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 cEGF EGF_CA TSP1_ADAMTS Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  104039883 NCBI-ProteinID:  XP_009511196 LinkDB All DBs Position Unknown AA seq 1174 aa AA seqDB search MYLLSLTLFPAHDMCSDLSSESRTDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPESSS PAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGSGHV FSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKMEN AELDIPIQNIFTKDLASSARLRVAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSSST SAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQDR VRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCPLM PCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGS SVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGVGIITRIRLCNSPVPQLNGKPCEG EARENKPCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVGEAR GTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKEVQ DACFVFNGVHRCENTEPGYNCLPCPPRFTGSQPFGRSVEDAMANKQVCKPRNPCTDGTHD CNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKD NCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRCDN CPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQCDNC PLEHNPDQEDADSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDH DDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVDISETD FRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFINT ERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGEHL RNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMADSG PIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgtacctactcagcctcaccttgttccctgctcatgatatgtgttcggatctctcttca gagtccaggaccgatgataacagcgtctttgatctctttgaactcattggtttcattcgg aagggagctgggcgtcgggcacctggggtgcacctggtgaagggaccagaatcctccagc cctgcttatcgcattgaagacgccagtcgcatccctgctgtccctgactccaagttccaa gacttattagatgccatccatgctgagaagggcttcatcctcctggccactctccggcaa gccaagaagagtagaggcacactactatctgtggaacagaaagatggctctggtcatgtc ttcagtttagtatcaaatggcaaggcaggcaccctggacctgagcctttctggtgatggc aagcagcagttggtgtcagtagaggatgccttgctagctacaggacactggaagaatatt accctgtttgtacaggaggaccgggctcagctatatgtggggtgtgagaaaatggagaat gctgaactagacatccccatccagaacatcttcactaaggacctggccagcagtgccagg ctccgtgttgccaaagggggagtcaatgacaatttccagggactgctgcagaatgtgcgg tttgtgtttggaacaactctggaaactatcctgaggaacaaaggctgctccagctccact agtgcaatcattactttggacaaccccatcaatggctccagcccagctatccgcactaat tatatcggccataaaacaaaggacatccaagcagtctgtggtttttcctgtgatgaacta acaaatatgtttgtggaactgcaagggctccggtccatggttacaacacttcaagacaga gttcgcaaagtgactgaagaaaacgaactcattgccaaagtggtccagatcactcctgga gtatgcattcataatggaatcttgcacaaaaataaagaggagtggactattgacagctgc actgaatgtacctgccagaactctgccactatatgtcggaaagtgtcctgtcctctcatg ccttgttccaatgccactgtgcctgatggggagtgctgcccccgatgttggcctagcgac tatgcagatgatggatggtctccttggtctgaatggacttcatgttctgtgacctgtggg aatgggattcagcagagagggcggtcctgtgacagtctcaataaccgctgtgaaggatct tctgtacagactcggacttgccaccttcaagagtgcgataagagatttaaacaggatggt ggctggagtcactggtcaccatggtcatcgtgttctgtcacttgtggcgtgggcatcatc actagaattcgtctctgcaattctccagtaccacagctgaatggcaaaccttgtgagggt gaggcgagagaaaacaaaccctgccagaaagatccttgcccaattaatggcaattgggga ccatggtctccatgggatgcatgcacagtgacatgtggaggaggacttcaaaaacgtagc cgtctctgcaataatcctgagccacagtacggtgggaagacttgcgtaggtgaagccaga gggactcaggtctgcaataaacaggactgtccaattgatgggtgcctgtctaatccctgc tttgcagggactacatgtaccagctcccctgatggttcctggaagtgtggcgcctgtcct gctggctaccatggtgatggtgttcactgccaagatattgatgagtgcaaagaggttcag gatgcctgctttgtcttcaatggagtgcacaggtgtgagaacactgaacccggctacaac tgtctgccatgtccaccacgtttcactggttcgcagccatttggtcgcagtgttgaggat gccatggctaacaaacaggtctgcaaaccacgtaatccctgcacagatggaacacatgac tgcaacaagaatgccaaatgtaattaccttggccacttcagcgaccccatgtatcgctgt gaatgtaaaccaggctatgctggcaatggcataatctgtggagaagacactgacttggat ggatggccaaatgagaaccttgtttgtgttgccaatgccacttaccactgtaaaaaagat aactgccctaacctgcccaactctgggcaggaagactatgacaaggatgggattggtgat gcctgtgacagcgatgatgatgatgatggtattcctgatgaccgggacaactgtccattc atctacaacccccagcagtacgattatgacagggatgatgttggagaccgctgtgataac tgcccctataatcacaaccctgatcaaactgacactgacaacaatggagaaggagatgca tgtgcagtggatattgatggagatggggtccttaatgaaagggacaactgccaatatgtc tacaatgtagaccagagagatacagacttggatggtgttggagatcagtgtgataactgt ccgctggaacacaatcctgaccaggaagatgctgattctgaccgcataggtgatcagtgt gacaacaaccaggacatagatgaagatggccatcaaaataatcttgataactgcccctat gtgcccaatgccaatcaagcagaccatgacaaggatggaaaaggtgacgcctgtgaccat gatgacgataatgatggtatccctgatgacaaagataactgcagattggttgccaaccct gatcaagctgattctgatggtgatggtcgtggagatgcttgcaaagatgactttgaccaa gacagcgtgccggacattgatgatatctgccctgaaaatgtggacatcagtgagactgac ttccgaaaatttcagatgattcccctggatcccaaaggaacatcccaaaatgatccaaac tgggttgttcgtcaccagggtaaagagctggttcagacagtcaactgtgaccctggcctt gcagttggttttgatgaattcaatgctgtggacttcagtggcaccttcttcatcaataca gaaagggatgatgattatgctggctttgtgtttggctaccaatctagcagtcgcttctat gttgtcatgtggaaacagatcacccagtcctactgggactcaacgccaaccaaagctcaa ggctactcaggtctctccatcaaagttgtgaattccaccaccggtccaggagaacacctt cgtaatgctttgtggcacacaggcaacactcctggccaggtgagaactttgtggcatgac cctcgtcacataggctggaaagacttcactgcatacagatggcgtcttagccatagacca aagactggttacatcagggttgtaatgtatgaagggaagaaaatcatggcagactcagga ccaatctacgataaaacctatgctggcggccggctaggattatttgtcttctctcaagaa atggtgttcttctcggatcttaaatatgaatgcagagatccataa

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